Project name: GGGHKGG2

Status: done

Started: 2026-02-23 06:22:59
Settings
Chain sequence(s) A: GGGHKGG
B: GGGHKGG
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:31)
Show buried residues

Minimal score value
-4.6664
Maximal score value
-1.0832
Average score
-2.7481
Total score value
-38.4728

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.2759
2 G A -2.1706
3 G A -3.2615
4 H A -4.6664
5 K A -3.7024
6 G A -2.9496
7 G A -1.9065
1 G B -1.0832
2 G B -2.2927
3 G B -2.6093
4 H B -3.5974
5 K B -4.5336
6 G B -2.8222
7 G B -1.6015
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Laboratory of Theory of Biopolymers 2018