| Chain sequence(s) |
A: GCPRLLMRCKQDSDCLAGCVCGPNGFCG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:31)
[INFO] Main: Simulation completed successfully. (00:00:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1660 | |
| 2 | C | A | 0.0548 | |
| 3 | P | A | -0.5263 | |
| 4 | R | A | -0.5900 | |
| 5 | L | A | 1.2458 | |
| 6 | L | A | 1.7066 | |
| 7 | M | A | 0.3869 | |
| 8 | R | A | -1.6017 | |
| 9 | C | A | -2.0395 | |
| 10 | K | A | -2.8420 | |
| 11 | Q | A | -2.7952 | |
| 12 | D | A | -1.7802 | |
| 13 | S | A | -1.1270 | |
| 14 | D | A | -1.5332 | |
| 15 | C | A | -0.3857 | |
| 16 | L | A | 1.0251 | |
| 17 | A | A | 0.4278 | |
| 18 | G | A | 0.0330 | |
| 19 | C | A | 0.0000 | |
| 20 | V | A | 0.4458 | |
| 21 | C | A | -1.0583 | |
| 22 | G | A | 0.0000 | |
| 23 | P | A | -0.7980 | |
| 24 | N | A | -1.5412 | |
| 25 | G | A | -1.1123 | |
| 26 | F | A | -0.3171 | |
| 27 | C | A | 0.0000 | |
| 28 | G | A | -0.3962 |