Project name: query_structure

Status: done

Started: 2026-03-16 23:19:39
Settings
Chain sequence(s) A: GCPRLLMRCKQDSDCLAGCVCGPNGFCG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:32)
Show buried residues

Minimal score value
-2.842
Maximal score value
1.7066
Average score
-0.5459
Total score value
-15.2841

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.1660
2 C A 0.0548
3 P A -0.5263
4 R A -0.5900
5 L A 1.2458
6 L A 1.7066
7 M A 0.3869
8 R A -1.6017
9 C A -2.0395
10 K A -2.8420
11 Q A -2.7952
12 D A -1.7802
13 S A -1.1270
14 D A -1.5332
15 C A -0.3857
16 L A 1.0251
17 A A 0.4278
18 G A 0.0330
19 C A 0.0000
20 V A 0.4458
21 C A -1.0583
22 G A 0.0000
23 P A -0.7980
24 N A -1.5412
25 G A -1.1123
26 F A -0.3171
27 C A 0.0000
28 G A -0.3962
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Laboratory of Theory of Biopolymers 2018