Project name: 300164

Status: done

Started: 2025-02-12 23:59:09
Settings
Chain sequence(s) A: KQNLELVNTNGSWHINRTALNCNESINTGFIAGLFYYHSFNSTGCPQRLSSCKPITFFRQGWGPLTDANISGSSEDKPYCWHYAPRPCEVVPALNVCGPVYCFTPSPVVVGTTDARGVPTYTWGENETDVFLLKSLRPPGGRWFGCTWMNSTGFVKTCGAPPCNIYGGKGGPNESDLHCPTDCFRKHPEATYSRCGAGPWLTPRCLVDYPYRLWHYPCTINFTLFKVRMFVGGFEHRFTAACNWTRGERCDIEDRDRSERT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:47)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:49)
Show buried residues

Minimal score value
-3.8044
Maximal score value
2.3191
Average score
-0.6256
Total score value
-163.2813

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
48 K A -2.4841
49 Q A -2.3835
50 N A -1.9157
51 L A -0.2551
52 E A -1.3999
53 L A 0.0026
54 V A 0.3813
55 N A -1.0873
56 T A -1.0307
57 N A -1.6481
58 G A -1.2408
59 S A -0.9052
60 W A -0.4453
61 H A -0.2448
62 I A 0.4037
63 N A 0.2537
64 R A 0.1471
65 T A 0.0000
66 A A 0.0000
67 L A 0.0200
68 N A -0.5781
69 C A -0.6942
70 N A -1.6218
71 E A -2.2159
72 S A -1.0150
73 I A -0.0841
74 N A -1.4601
75 T A -0.6073
76 G A -0.7295
77 F A 0.4260
78 I A 0.3538
79 A A 1.1969
80 G A 1.1687
81 L A 1.6141
82 F A 2.3191
83 Y A 2.2268
84 Y A 1.3794
85 H A -0.0138
86 S A 0.0762
87 F A 0.1333
88 N A -1.1448
89 S A -0.8508
90 T A -0.8572
91 G A -1.1987
92 C A 0.0000
93 P A -1.3117
94 Q A -2.1332
95 R A -2.3679
96 L A -0.9974
97 S A -1.1268
98 S A -1.4050
99 C A -0.8229
100 K A -0.4516
101 P A -0.2774
102 I A -0.3507
103 T A -0.3077
104 F A -0.1689
105 F A 0.0000
106 R A -2.1352
107 Q A -1.7224
108 G A 0.0000
109 W A 0.0558
110 G A -0.3959
111 P A -0.4606
112 L A -0.6024
113 T A -1.0088
114 D A -1.4126
115 A A 0.0000
116 N A -1.7700
117 I A -1.2674
118 S A -1.0556
119 G A -0.8385
120 S A -1.1936
121 S A -1.7782
122 E A -2.7678
123 D A -2.4891
124 K A -1.9147
125 P A 0.0000
126 Y A -0.2261
127 C A 0.0000
128 W A 0.0000
129 H A 0.0000
130 Y A -0.7588
131 A A -0.7177
132 P A 0.0000
133 R A -1.9712
134 P A -1.5024
135 C A -1.3123
136 E A -1.9595
137 V A -0.2643
138 V A 0.0000
139 P A -0.9145
140 A A 0.0000
141 L A -1.1073
142 N A -1.3406
143 V A 0.0000
144 C A 0.0000
145 G A 0.0000
146 P A 0.0000
147 V A 0.0000
148 Y A 0.0000
149 C A 0.0000
150 F A 0.0000
151 T A -0.3982
152 P A 0.0000
153 S A -0.5889
154 P A 0.2215
155 V A 0.6852
156 V A 0.7571
157 V A 0.6041
158 G A 0.0000
159 T A 0.0000
160 T A 0.2183
161 D A -0.6291
162 A A -0.5266
163 R A -1.4561
164 G A -0.3053
165 V A 0.8970
166 P A 0.4395
167 T A 0.3398
168 Y A 0.5758
169 T A -0.1136
170 W A -0.0319
171 G A 0.0000
172 E A -2.4224
173 N A -2.4954
174 E A -2.6437
175 T A -1.4977
176 D A 0.0000
177 V A -0.6365
178 F A 0.0000
179 L A -0.4715
180 L A 0.0000
181 K A -1.7752
182 S A -0.8380
183 L A 0.5223
184 R A -0.2003
185 P A -0.5936
186 P A -0.6364
187 G A -0.6904
188 G A -0.7814
189 R A -1.6175
190 W A 0.0000
191 F A 0.0000
192 G A 0.0000
193 C A 0.0000
194 T A 0.0000
195 W A 0.0000
196 M A 0.0000
197 N A -0.3224
198 S A -0.6344
199 T A -0.4023
200 G A 0.1793
201 F A 1.3420
202 V A 0.0000
203 K A -0.4815
204 T A -0.4465
205 C A 0.0000
206 G A 0.0000
207 A A 0.0000
208 P A -0.8987
209 P A 0.0000
210 C A 0.0000
211 N A 0.0000
212 I A 0.0000
213 Y A 0.0000
214 G A -0.8799
215 G A -1.5958
216 K A -2.0279
217 G A -1.6372
218 G A -1.6468
219 P A -1.5116
220 N A -2.6114
221 E A -2.9707
222 S A -1.9746
223 D A -2.0500
224 L A 0.0000
225 H A -0.6108
226 C A 0.0000
227 P A 0.0000
228 T A 0.0000
229 D A -0.9654
230 C A 0.0000
231 F A -1.1283
232 R A -1.9513
233 K A -1.1433
234 H A 0.0000
235 P A -1.0943
236 E A -1.9805
237 A A 0.0000
238 T A -1.2408
239 Y A 0.0000
240 S A -0.5296
241 R A -1.1445
242 C A 0.0000
243 G A 0.0000
244 A A 0.0000
245 G A 0.0000
246 P A 0.0000
247 W A -0.0410
248 L A 0.0000
249 T A -0.4278
250 P A -0.4997
251 R A -0.6963
252 C A 0.0000
253 L A 0.0000
254 V A 0.0000
255 D A -0.3006
256 Y A 0.0000
257 P A -0.5144
258 Y A 0.0000
259 R A 0.0000
260 L A 0.2554
261 W A 0.0000
262 H A 0.0000
263 Y A 0.0000
264 P A 0.0634
265 C A -0.2175
266 T A 0.0000
267 I A 0.0994
268 N A -0.7762
269 F A -0.1186
270 T A 0.5005
271 L A 0.7944
272 F A 0.3770
273 K A -1.7010
274 V A -1.5340
275 R A -2.3922
276 M A -0.5021
277 F A 0.8495
278 V A 0.0000
279 G A 0.0159
280 G A 0.5380
281 F A 1.6229
282 E A 0.0554
283 H A 0.0000
284 R A -2.5149
285 F A 0.0000
286 T A -0.8531
287 A A 0.0000
288 A A 0.0000
289 C A 0.0000
290 N A -0.6952
291 W A -0.4842
292 T A -1.4500
293 R A -2.5802
294 G A -2.4501
295 E A -3.2051
296 R A -2.9981
297 C A -1.6387
298 D A -1.5301
299 I A -0.2807
300 E A -2.5780
301 D A -3.0846
302 R A -3.4919
303 D A -3.8044
304 R A -3.6981
305 S A -2.8954
306 E A -3.1513
307 R A -2.9768
308 T A -1.3605
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Laboratory of Theory of Biopolymers 2018