Project name: 83f08de2c9781c3

Status: done

Started: 2026-06-27 15:35:46
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Chain sequence(s) A: KLVFFAE
C: KLVFFAE
B: KLVFFAE
E: KLVFFAE
D: KLVFFAE
G: KLVFFAE
F: KLVFFAE
I: KLVFFAE
H: KLVFFAE
K: KLVFFAE
J: KLVFFAE
M: KLVFFAE
L: KLVFFAE
O: KLVFFAE
N: KLVFFAE
Q: KLVFFAE
P: KLVFFAE
S: KLVFFAE
R: KLVFFAE
T: KLVFFAE
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:10)
Show buried residues

Minimal score value
-3.1942
Maximal score value
3.872
Average score
-0.3115
Total score value
-43.6125

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -2.7261
2 L A -1.2008
3 V A -0.0808
4 F A 0.5365
5 F A 0.0000
6 A A -1.5343
7 E A -2.6410
1 K B -2.2495
2 L B 0.0000
3 V B 0.0000
4 F B 0.0000
5 F B 0.0000
6 A B 0.0000
7 E B -2.7384
1 K C -2.2181
2 L C 0.0000
3 V C 0.0000
4 F C 0.0000
5 F C 0.0000
6 A C 0.0000
7 E C -2.9646
1 K D -1.5559
2 L D 1.0470
3 V D 2.2676
4 F D 3.0083
5 F D 1.5708
6 A D -0.3029
7 E D -2.2931
1 K E -2.5699
2 L E -0.7940
3 V E 0.0000
4 F E 1.8280
5 F E 0.0000
6 A E -0.6258
7 E E -2.3522
1 K F -2.0998
2 L F 0.0818
3 V F 2.1450
4 F F 2.5205
5 F F 2.1557
6 A F -0.3703
7 E F -2.1967
1 K G -2.4506
2 L G 0.0000
3 V G 1.3762
4 F G 0.0000
5 F G 1.0278
6 A G 0.0000
7 E G -2.6970
1 K H -2.9497
2 L H 0.0000
3 V H 1.0202
4 F H 0.0000
5 F H 0.6492
6 A H 0.0000
7 E H -3.0777
1 K I -2.7988
2 L I 0.0000
3 V I 0.7223
4 F I 0.0000
5 F I 0.5150
6 A I 0.0000
7 E I -2.9466
1 K J -3.0715
2 L J 0.0000
3 V J 0.8524
4 F J 0.0000
5 F J 0.7195
6 A J -1.2612
7 E J -3.1425
1 K K -2.7096
2 L K -0.5855
3 V K 1.0296
4 F K 1.6839
5 F K 0.6921
6 A K -1.0822
7 E K -3.0926
1 K L -3.0030
2 L L -0.9417
3 V L 0.8693
4 F L 1.7388
5 F L 0.6890
6 A L -1.0549
7 E L -2.9391
1 K M -2.8180
2 L M -0.5085
3 V M 0.9489
4 F M 1.8522
5 F M 0.6874
6 A M -0.9988
7 E M -3.0711
1 K N -2.5921
2 L N -0.2053
3 V N 1.6579
4 F N 3.0052
5 F N 1.7280
6 A N -0.0314
7 E N -2.4361
1 K O -1.4229
2 L O 1.4893
3 V O 2.8953
4 F O 3.8720
5 F O 2.0720
6 A O -0.0162
7 E O -2.1587
1 K P -1.5268
2 L P 1.0479
3 V P 1.9497
4 F P 3.2012
5 F P 1.1934
6 A P -0.3529
7 E P -2.2817
1 K Q -2.8395
2 L Q -0.4698
3 V Q 0.9312
4 F Q 2.4022
5 F Q 1.2575
6 A Q -0.1431
7 E Q -2.3293
1 K R -2.3720
2 L R -0.2366
3 V R 0.0000
4 F R 1.7094
5 F R 0.0000
6 A R -1.0499
7 E R -3.1942
1 K S -2.5589
2 L S -0.5515
3 V S 0.0000
4 F S 2.1219
5 F S 0.0000
6 A S -0.3877
7 E S -2.4728
1 K T -1.7103
2 L T 0.9496
3 V T 1.8021
4 F T 2.7860
5 F T 0.9689
6 A T -0.4891
7 E T -2.3446
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Laboratory of Theory of Biopolymers 2018