| Chain sequence(s) |
A: KLVFFAE
C: KLVFFAE B: KLVFFAE E: KLVFFAE D: KLVFFAE G: KLVFFAE F: KLVFFAE I: KLVFFAE H: KLVFFAE K: KLVFFAE J: KLVFFAE M: KLVFFAE L: KLVFFAE O: KLVFFAE N: KLVFFAE Q: KLVFFAE P: KLVFFAE S: KLVFFAE R: KLVFFAE T: KLVFFAE input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:06)
[INFO] Main: Simulation completed successfully. (00:06:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -2.7261 | |
| 2 | L | A | -1.2008 | |
| 3 | V | A | -0.0808 | |
| 4 | F | A | 0.5365 | |
| 5 | F | A | 0.0000 | |
| 6 | A | A | -1.5343 | |
| 7 | E | A | -2.6410 | |
| 1 | K | B | -2.2495 | |
| 2 | L | B | 0.0000 | |
| 3 | V | B | 0.0000 | |
| 4 | F | B | 0.0000 | |
| 5 | F | B | 0.0000 | |
| 6 | A | B | 0.0000 | |
| 7 | E | B | -2.7384 | |
| 1 | K | C | -2.2181 | |
| 2 | L | C | 0.0000 | |
| 3 | V | C | 0.0000 | |
| 4 | F | C | 0.0000 | |
| 5 | F | C | 0.0000 | |
| 6 | A | C | 0.0000 | |
| 7 | E | C | -2.9646 | |
| 1 | K | D | -1.5559 | |
| 2 | L | D | 1.0470 | |
| 3 | V | D | 2.2676 | |
| 4 | F | D | 3.0083 | |
| 5 | F | D | 1.5708 | |
| 6 | A | D | -0.3029 | |
| 7 | E | D | -2.2931 | |
| 1 | K | E | -2.5699 | |
| 2 | L | E | -0.7940 | |
| 3 | V | E | 0.0000 | |
| 4 | F | E | 1.8280 | |
| 5 | F | E | 0.0000 | |
| 6 | A | E | -0.6258 | |
| 7 | E | E | -2.3522 | |
| 1 | K | F | -2.0998 | |
| 2 | L | F | 0.0818 | |
| 3 | V | F | 2.1450 | |
| 4 | F | F | 2.5205 | |
| 5 | F | F | 2.1557 | |
| 6 | A | F | -0.3703 | |
| 7 | E | F | -2.1967 | |
| 1 | K | G | -2.4506 | |
| 2 | L | G | 0.0000 | |
| 3 | V | G | 1.3762 | |
| 4 | F | G | 0.0000 | |
| 5 | F | G | 1.0278 | |
| 6 | A | G | 0.0000 | |
| 7 | E | G | -2.6970 | |
| 1 | K | H | -2.9497 | |
| 2 | L | H | 0.0000 | |
| 3 | V | H | 1.0202 | |
| 4 | F | H | 0.0000 | |
| 5 | F | H | 0.6492 | |
| 6 | A | H | 0.0000 | |
| 7 | E | H | -3.0777 | |
| 1 | K | I | -2.7988 | |
| 2 | L | I | 0.0000 | |
| 3 | V | I | 0.7223 | |
| 4 | F | I | 0.0000 | |
| 5 | F | I | 0.5150 | |
| 6 | A | I | 0.0000 | |
| 7 | E | I | -2.9466 | |
| 1 | K | J | -3.0715 | |
| 2 | L | J | 0.0000 | |
| 3 | V | J | 0.8524 | |
| 4 | F | J | 0.0000 | |
| 5 | F | J | 0.7195 | |
| 6 | A | J | -1.2612 | |
| 7 | E | J | -3.1425 | |
| 1 | K | K | -2.7096 | |
| 2 | L | K | -0.5855 | |
| 3 | V | K | 1.0296 | |
| 4 | F | K | 1.6839 | |
| 5 | F | K | 0.6921 | |
| 6 | A | K | -1.0822 | |
| 7 | E | K | -3.0926 | |
| 1 | K | L | -3.0030 | |
| 2 | L | L | -0.9417 | |
| 3 | V | L | 0.8693 | |
| 4 | F | L | 1.7388 | |
| 5 | F | L | 0.6890 | |
| 6 | A | L | -1.0549 | |
| 7 | E | L | -2.9391 | |
| 1 | K | M | -2.8180 | |
| 2 | L | M | -0.5085 | |
| 3 | V | M | 0.9489 | |
| 4 | F | M | 1.8522 | |
| 5 | F | M | 0.6874 | |
| 6 | A | M | -0.9988 | |
| 7 | E | M | -3.0711 | |
| 1 | K | N | -2.5921 | |
| 2 | L | N | -0.2053 | |
| 3 | V | N | 1.6579 | |
| 4 | F | N | 3.0052 | |
| 5 | F | N | 1.7280 | |
| 6 | A | N | -0.0314 | |
| 7 | E | N | -2.4361 | |
| 1 | K | O | -1.4229 | |
| 2 | L | O | 1.4893 | |
| 3 | V | O | 2.8953 | |
| 4 | F | O | 3.8720 | |
| 5 | F | O | 2.0720 | |
| 6 | A | O | -0.0162 | |
| 7 | E | O | -2.1587 | |
| 1 | K | P | -1.5268 | |
| 2 | L | P | 1.0479 | |
| 3 | V | P | 1.9497 | |
| 4 | F | P | 3.2012 | |
| 5 | F | P | 1.1934 | |
| 6 | A | P | -0.3529 | |
| 7 | E | P | -2.2817 | |
| 1 | K | Q | -2.8395 | |
| 2 | L | Q | -0.4698 | |
| 3 | V | Q | 0.9312 | |
| 4 | F | Q | 2.4022 | |
| 5 | F | Q | 1.2575 | |
| 6 | A | Q | -0.1431 | |
| 7 | E | Q | -2.3293 | |
| 1 | K | R | -2.3720 | |
| 2 | L | R | -0.2366 | |
| 3 | V | R | 0.0000 | |
| 4 | F | R | 1.7094 | |
| 5 | F | R | 0.0000 | |
| 6 | A | R | -1.0499 | |
| 7 | E | R | -3.1942 | |
| 1 | K | S | -2.5589 | |
| 2 | L | S | -0.5515 | |
| 3 | V | S | 0.0000 | |
| 4 | F | S | 2.1219 | |
| 5 | F | S | 0.0000 | |
| 6 | A | S | -0.3877 | |
| 7 | E | S | -2.4728 | |
| 1 | K | T | -1.7103 | |
| 2 | L | T | 0.9496 | |
| 3 | V | T | 1.8021 | |
| 4 | F | T | 2.7860 | |
| 5 | F | T | 0.9689 | |
| 6 | A | T | -0.4891 | |
| 7 | E | T | -2.3446 |