Project name: query_structure

Status: done

Started: 2026-03-17 00:15:10
Settings
Chain sequence(s) A: NAINMVNMANALNMINMANALNMANAINMVNMANALNMINMANALNMA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:26)
Show buried residues

Minimal score value
-0.9837
Maximal score value
1.5034
Average score
0.2622
Total score value
12.5833

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -0.6561
2 A A 0.5295
3 I A 1.5034
4 N A -0.2649
5 M A 0.9479
6 V A 1.0819
7 N A -0.3974
8 M A 0.5765
9 A A 0.3283
10 N A -0.9735
11 A A 0.2466
12 L A 0.7093
13 N A -0.7411
14 M A 0.6895
15 I A 0.8826
16 N A -0.6782
17 M A 0.5579
18 A A 0.2566
19 N A -0.9837
20 A A 0.0925
21 L A 0.5242
22 N A -0.9312
23 M A 0.5046
24 A A 0.0801
25 N A -0.7837
26 A A 0.5530
27 I A 1.0994
28 N A -0.4074
29 M A 1.0364
30 V A 1.4803
31 N A -0.3890
32 M A 0.6706
33 A A 0.4904
34 N A -0.7666
35 A A 0.4154
36 L A 0.8056
37 N A -0.6569
38 M A 0.8841
39 I A 1.3649
40 N A -0.4155
41 M A 0.7727
42 A A 0.5601
43 N A -0.5169
44 A A 0.4979
45 L A 1.1470
46 N A -0.4399
47 M A 0.7565
48 A A 0.5396
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Laboratory of Theory of Biopolymers 2018