| Chain sequence(s) |
A: EAQNNYWNNVDQTID
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.3778 | |
| 2 | A | A | -2.0282 | |
| 3 | Q | A | -2.4059 | |
| 4 | N | A | -2.2673 | |
| 5 | N | A | -1.8084 | |
| 6 | Y | A | 0.2111 | |
| 7 | W | A | 0.3129 | |
| 8 | N | A | -1.3111 | |
| 9 | N | A | -1.3227 | |
| 10 | V | A | 0.0416 | |
| 11 | D | A | -1.7193 | |
| 12 | Q | A | -1.3581 | |
| 13 | T | A | -0.5153 | |
| 14 | I | A | 0.4606 | |
| 15 | D | A | -0.9668 |