| Chain sequence(s) |
L: CGPGPPCDWGTSPDWC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 205 | C | L | 0.8713 | |
| 206 | G | L | -0.2915 | |
| 207 | P | L | -0.4011 | |
| 208 | G | L | -0.5962 | |
| 209 | P | L | -0.3865 | |
| 210 | P | L | -0.1693 | |
| 211 | C | L | 0.3572 | |
| 212 | D | L | -1.4415 | |
| 213 | W | L | 0.7811 | |
| 214 | G | L | -0.2659 | |
| 215 | T | L | -0.1921 | |
| 216 | S | L | -0.2595 | |
| 217 | P | L | -0.6093 | |
| 218 | D | L | -1.6525 | |
| 219 | W | L | 0.7964 | |
| 220 | C | L | 1.1079 |