| Chain sequence(s) |
A: MIGSEKQVNWAKSIIEKEVEAWEAIGVDVREVAAFLRSISDARVIIDNRNLIHFQSSGISYSLESSPLNSPIFLRRFSACSVGFEEIPTALQRIRSVYTAKLLED
C: MIGSEKQVNWAKSIIEKEVEAWEAIGVDVREVAAFLRSISDARVIIDNRNLIHFQSSGISYSLESSPLNSPIFLRRFSACSVGFEEIPTALQRIRSVYTAKLLED B: MIGSEKQVNWAKSIIEKEVEAWEAIGVDVREVAAFLRSISDARVIIDNRNLIHFQSSGISYSLESSPLNSPIFLRRFSACSVGFEEIPTALQRIRSVYTAKLLED input PDB |
| Selected Chain(s) | A,C,B |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.2303 | |
| 2 | I | A | 0.1005 | |
| 3 | G | A | -1.1636 | |
| 4 | S | A | 0.0000 | |
| 5 | E | A | -2.8107 | |
| 6 | K | A | -2.8651 | |
| 7 | Q | A | -2.1141 | |
| 8 | V | A | -1.8170 | |
| 9 | N | A | -2.5017 | |
| 10 | W | A | -1.8430 | |
| 11 | A | A | 0.0000 | |
| 12 | K | A | -2.8090 | |
| 13 | S | A | -2.0389 | |
| 14 | I | A | 0.0000 | |
| 15 | I | A | 0.0000 | |
| 16 | E | A | -3.1816 | |
| 17 | K | A | -3.3815 | |
| 18 | E | A | 0.0000 | |
| 19 | V | A | 0.0000 | |
| 20 | E | A | -3.3533 | |
| 21 | A | A | -2.3566 | |
| 22 | W | A | 0.0000 | |
| 23 | E | A | -3.2847 | |
| 24 | A | A | -1.4326 | |
| 25 | I | A | 0.0000 | |
| 26 | G | A | -1.3685 | |
| 27 | V | A | -1.4393 | |
| 28 | D | A | -2.7220 | |
| 29 | V | A | 0.0000 | |
| 30 | R | A | -2.9525 | |
| 31 | E | A | -2.2638 | |
| 32 | V | A | 0.0000 | |
| 33 | A | A | 0.0000 | |
| 34 | A | A | -1.0588 | |
| 35 | F | A | 0.0000 | |
| 36 | L | A | 0.0000 | |
| 37 | R | A | -2.0445 | |
| 38 | S | A | -0.3006 | |
| 39 | I | A | 0.0000 | |
| 40 | S | A | 0.0340 | |
| 41 | D | A | 0.0000 | |
| 42 | A | A | 0.0000 | |
| 43 | R | A | -0.8811 | |
| 44 | V | A | -0.7136 | |
| 45 | I | A | 0.0000 | |
| 46 | I | A | 0.0000 | |
| 47 | D | A | -1.8441 | |
| 48 | N | A | 0.0000 | |
| 49 | R | A | -1.0421 | |
| 50 | N | A | -1.0967 | |
| 51 | L | A | 0.4845 | |
| 52 | I | A | 0.0000 | |
| 53 | H | A | -1.1005 | |
| 54 | F | A | 0.0000 | |
| 55 | Q | A | -1.3249 | |
| 56 | S | A | -1.1401 | |
| 57 | S | A | -0.5936 | |
| 58 | G | A | -0.2219 | |
| 59 | I | A | -0.1468 | |
| 60 | S | A | -0.0675 | |
| 61 | Y | A | 0.3079 | |
| 62 | S | A | -0.5080 | |
| 63 | L | A | 0.0000 | |
| 64 | E | A | -1.7103 | |
| 65 | S | A | -0.7111 | |
| 66 | S | A | 0.0000 | |
| 67 | P | A | 0.0773 | |
| 68 | L | A | 0.0000 | |
| 69 | N | A | -0.6645 | |
| 70 | S | A | 0.1215 | |
| 71 | P | A | -0.4461 | |
| 72 | I | A | 1.1255 | |
| 73 | F | A | 0.2913 | |
| 74 | L | A | 0.0000 | |
| 75 | R | A | -1.9179 | |
| 76 | R | A | -1.5352 | |
| 77 | F | A | 0.0000 | |
| 78 | S | A | -0.9186 | |
| 79 | A | A | -0.9441 | |
| 80 | C | A | -0.1300 | |
| 81 | S | A | 0.4499 | |
| 82 | V | A | 1.0351 | |
| 83 | G | A | -0.4256 | |
| 84 | F | A | -1.3727 | |
| 85 | E | A | -2.6960 | |
| 86 | E | A | -2.6296 | |
| 87 | I | A | 0.0000 | |
| 88 | P | A | -1.5825 | |
| 89 | T | A | -1.7945 | |
| 90 | A | A | 0.0000 | |
| 91 | L | A | 0.0000 | |
| 92 | Q | A | -2.1692 | |
| 93 | R | A | -1.9438 | |
| 94 | I | A | 0.0000 | |
| 95 | R | A | -1.2579 | |
| 96 | S | A | -0.7693 | |
| 97 | V | A | 0.1205 | |
| 98 | Y | A | 0.0110 | |
| 99 | T | A | 0.0493 | |
| 100 | A | A | -0.2748 | |
| 101 | K | A | -1.2829 | |
| 102 | L | A | 0.1075 | |
| 103 | L | A | 0.0477 | |
| 104 | E | A | -2.1066 | |
| 105 | D | A | -2.1191 | |
| 1 | M | B | 0.6248 | |
| 2 | I | B | 1.3301 | |
| 3 | G | B | -0.7209 | |
| 4 | S | B | -1.6605 | |
| 5 | E | B | -2.6926 | |
| 6 | K | B | -2.9084 | |
| 7 | Q | B | -2.1186 | |
| 8 | V | B | -1.5543 | |
| 9 | N | B | -1.7853 | |
| 10 | W | B | -1.2084 | |
| 11 | A | B | 0.0000 | |
| 12 | K | B | -1.5803 | |
| 13 | S | B | -1.3737 | |
| 14 | I | B | 0.0000 | |
| 15 | I | B | 0.0000 | |
| 16 | E | B | -1.8540 | |
| 17 | K | B | -2.8757 | |
| 18 | E | B | 0.0000 | |
| 19 | V | B | 0.0000 | |
| 20 | E | B | -2.7818 | |
| 21 | A | B | -2.0835 | |
| 22 | W | B | 0.0000 | |
| 23 | E | B | -3.1717 | |
| 24 | A | B | -1.3422 | |
| 25 | I | B | 0.0000 | |
| 26 | G | B | -1.3894 | |
| 27 | V | B | -1.4799 | |
| 28 | D | B | -2.7456 | |
| 29 | V | B | 0.0000 | |
| 30 | R | B | -2.9795 | |
| 31 | E | B | -2.2526 | |
| 32 | V | B | 0.0000 | |
| 33 | A | B | 0.0000 | |
| 34 | A | B | -0.8663 | |
| 35 | F | B | 0.0000 | |
| 36 | L | B | 0.0000 | |
| 37 | R | B | -0.5381 | |
| 38 | S | B | 0.2548 | |
| 39 | I | B | 0.0000 | |
| 40 | S | B | 0.3091 | |
| 41 | D | B | -0.0736 | |
| 42 | A | B | 0.0000 | |
| 43 | R | B | -2.1365 | |
| 44 | V | B | -1.4024 | |
| 45 | I | B | 0.0000 | |
| 46 | I | B | 0.0000 | |
| 47 | D | B | -2.3783 | |
| 48 | N | B | 0.0000 | |
| 49 | R | B | -1.6133 | |
| 50 | N | B | -1.3470 | |
| 51 | L | B | 0.2775 | |
| 52 | I | B | 0.0000 | |
| 53 | H | B | -1.2577 | |
| 54 | F | B | 0.0000 | |
| 55 | Q | B | -1.3170 | |
| 56 | S | B | -0.9422 | |
| 57 | S | B | -0.5679 | |
| 58 | G | B | -0.1901 | |
| 59 | I | B | -0.0972 | |
| 60 | S | B | -0.0266 | |
| 61 | Y | B | 0.3195 | |
| 62 | S | B | 0.0000 | |
| 63 | L | B | 0.0000 | |
| 64 | E | B | -1.6980 | |
| 65 | S | B | -0.7030 | |
| 66 | S | B | 0.0000 | |
| 67 | P | B | 0.0247 | |
| 68 | L | B | 0.0000 | |
| 69 | N | B | -0.6786 | |
| 70 | S | B | 0.0580 | |
| 71 | P | B | -0.5165 | |
| 72 | I | B | 1.0168 | |
| 73 | F | B | 0.0000 | |
| 74 | L | B | 0.0000 | |
| 75 | R | B | -1.9730 | |
| 76 | R | B | -1.5800 | |
| 77 | F | B | 0.0000 | |
| 78 | S | B | -0.8966 | |
| 79 | A | B | -0.1978 | |
| 80 | C | B | 0.3110 | |
| 81 | S | B | 0.6005 | |
| 82 | V | B | 1.1897 | |
| 83 | G | B | -0.4623 | |
| 84 | F | B | -1.3146 | |
| 85 | E | B | -2.7081 | |
| 86 | E | B | -2.6495 | |
| 87 | I | B | 0.0000 | |
| 88 | P | B | -1.6033 | |
| 89 | T | B | -1.7769 | |
| 90 | A | B | 0.0000 | |
| 91 | L | B | 0.0000 | |
| 92 | Q | B | -2.2231 | |
| 93 | R | B | -2.0734 | |
| 94 | I | B | 0.0000 | |
| 95 | R | B | -1.3388 | |
| 96 | S | B | -0.8921 | |
| 97 | V | B | 0.1180 | |
| 98 | Y | B | 0.0000 | |
| 99 | T | B | 0.0269 | |
| 100 | A | B | -0.2800 | |
| 101 | K | B | -1.2653 | |
| 102 | L | B | 0.2183 | |
| 103 | L | B | 0.2189 | |
| 104 | E | B | -2.0784 | |
| 105 | D | B | -2.1041 | |
| 1 | M | C | 1.0350 | |
| 2 | I | C | 1.6275 | |
| 3 | G | C | -0.5294 | |
| 4 | S | C | -1.6789 | |
| 5 | E | C | -2.6717 | |
| 6 | K | C | -2.9916 | |
| 7 | Q | C | -2.2304 | |
| 8 | V | C | -1.5944 | |
| 9 | N | C | -2.1451 | |
| 10 | W | C | -1.4277 | |
| 11 | A | C | 0.0000 | |
| 12 | K | C | -1.7458 | |
| 13 | S | C | -1.0908 | |
| 14 | I | C | 0.0000 | |
| 15 | I | C | 0.0000 | |
| 16 | E | C | -1.5618 | |
| 17 | K | C | -2.0792 | |
| 18 | E | C | 0.0000 | |
| 19 | V | C | 0.0000 | |
| 20 | E | C | -1.7950 | |
| 21 | A | C | -1.4796 | |
| 22 | W | C | 0.0000 | |
| 23 | E | C | -2.2670 | |
| 24 | A | C | -1.0488 | |
| 25 | I | C | 0.0000 | |
| 26 | G | C | -1.2343 | |
| 27 | V | C | -1.3270 | |
| 28 | D | C | -2.6448 | |
| 29 | V | C | 0.0000 | |
| 30 | R | C | -2.9374 | |
| 31 | E | C | -2.2188 | |
| 32 | V | C | 0.0000 | |
| 33 | A | C | 0.0000 | |
| 34 | A | C | -0.8790 | |
| 35 | F | C | 0.0000 | |
| 36 | L | C | 0.0000 | |
| 37 | R | C | -0.6163 | |
| 38 | S | C | 0.2669 | |
| 39 | I | C | 0.0000 | |
| 40 | S | C | 0.5297 | |
| 41 | D | C | 0.0000 | |
| 42 | A | C | 0.0000 | |
| 43 | R | C | -1.9939 | |
| 44 | V | C | -1.2786 | |
| 45 | I | C | 0.0000 | |
| 46 | I | C | 0.0000 | |
| 47 | D | C | -2.3788 | |
| 48 | N | C | 0.0000 | |
| 49 | R | C | -1.6640 | |
| 50 | N | C | -1.3177 | |
| 51 | L | C | 0.3148 | |
| 52 | I | C | 0.0000 | |
| 53 | H | C | -1.1020 | |
| 54 | F | C | 0.0000 | |
| 55 | Q | C | -1.3309 | |
| 56 | S | C | -0.9849 | |
| 57 | S | C | -0.6415 | |
| 58 | G | C | -0.2723 | |
| 59 | I | C | -0.1254 | |
| 60 | S | C | 0.1352 | |
| 61 | Y | C | 0.3335 | |
| 62 | S | C | -0.4927 | |
| 63 | L | C | 0.0000 | |
| 64 | E | C | -1.7129 | |
| 65 | S | C | -0.7106 | |
| 66 | S | C | 0.0000 | |
| 67 | P | C | 0.0103 | |
| 68 | L | C | 0.0000 | |
| 69 | N | C | -0.8974 | |
| 70 | S | C | 0.0374 | |
| 71 | P | C | -0.5078 | |
| 72 | I | C | 1.0237 | |
| 73 | F | C | 0.0000 | |
| 74 | L | C | 0.0000 | |
| 75 | R | C | -1.9534 | |
| 76 | R | C | -1.5162 | |
| 77 | F | C | 0.0000 | |
| 78 | S | C | -0.9536 | |
| 79 | A | C | -0.2148 | |
| 80 | C | C | 0.0000 | |
| 81 | S | C | 0.4350 | |
| 82 | V | C | 1.1691 | |
| 83 | G | C | -0.4689 | |
| 84 | F | C | -1.3181 | |
| 85 | E | C | -2.7162 | |
| 86 | E | C | -2.6718 | |
| 87 | I | C | 0.0000 | |
| 88 | P | C | -1.6073 | |
| 89 | T | C | -1.7542 | |
| 90 | A | C | 0.0000 | |
| 91 | L | C | 0.0000 | |
| 92 | Q | C | -2.1488 | |
| 93 | R | C | -1.8732 | |
| 94 | I | C | 0.0000 | |
| 95 | R | C | -1.2120 | |
| 96 | S | C | -0.6604 | |
| 97 | V | C | 0.2250 | |
| 98 | Y | C | 0.1495 | |
| 99 | T | C | 0.2096 | |
| 100 | A | C | -0.1592 | |
| 101 | K | C | -1.0300 | |
| 102 | L | C | 0.3639 | |
| 103 | L | C | 0.1818 | |
| 104 | E | C | -2.0256 | |
| 105 | D | C | -2.0427 |