| Chain sequence(s) |
A: AMHVAQPAVVLASSRGIASFVCEYASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTSSGNQVNLTIQGLRAMDTGLYICKVEAGCKNFFWKTFTSCGIGNGTQIYV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:46)
[INFO] Main: Simulation completed successfully. (00:00:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.1889 | |
| 2 | M | A | -0.0337 | |
| 3 | H | A | -0.7217 | |
| 4 | V | A | 0.0000 | |
| 5 | A | A | -0.4708 | |
| 6 | Q | A | -0.2205 | |
| 7 | P | A | -0.0420 | |
| 8 | A | A | 0.1471 | |
| 9 | V | A | 1.3098 | |
| 10 | V | A | 1.5627 | |
| 11 | L | A | 2.2814 | |
| 12 | A | A | 0.8314 | |
| 13 | S | A | -0.1263 | |
| 14 | S | A | -0.9142 | |
| 15 | R | A | -2.1734 | |
| 16 | G | A | 0.0000 | |
| 17 | I | A | -0.3566 | |
| 18 | A | A | 0.0000 | |
| 19 | S | A | -0.0533 | |
| 20 | F | A | 0.0000 | |
| 21 | V | A | -0.2923 | |
| 22 | C | A | 0.0000 | |
| 23 | E | A | -1.3017 | |
| 24 | Y | A | 0.0000 | |
| 25 | A | A | -0.7568 | |
| 26 | S | A | -1.0956 | |
| 27 | P | A | -0.9295 | |
| 28 | G | A | -1.3404 | |
| 29 | K | A | -2.1351 | |
| 30 | A | A | 0.0000 | |
| 31 | T | A | -0.9949 | |
| 32 | E | A | -0.9410 | |
| 33 | V | A | 0.0000 | |
| 34 | R | A | -0.6222 | |
| 35 | V | A | 0.0000 | |
| 36 | T | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | L | A | -0.2287 | |
| 39 | R | A | -0.7407 | |
| 40 | Q | A | -1.0104 | |
| 41 | A | A | -1.1288 | |
| 42 | D | A | -2.1561 | |
| 43 | S | A | -1.4660 | |
| 44 | Q | A | -1.5888 | |
| 45 | V | A | -0.2622 | |
| 46 | T | A | -0.6976 | |
| 47 | E | A | -1.5871 | |
| 48 | V | A | -0.2175 | |
| 49 | C | A | 0.0000 | |
| 50 | A | A | -0.0631 | |
| 51 | A | A | 0.0000 | |
| 52 | T | A | -0.3173 | |
| 53 | Y | A | 0.0000 | |
| 54 | M | A | -0.5122 | |
| 55 | M | A | -0.7136 | |
| 56 | G | A | -1.3121 | |
| 57 | N | A | -2.1897 | |
| 58 | E | A | -2.4730 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -0.5226 | |
| 61 | F | A | 0.0370 | |
| 62 | L | A | 0.4521 | |
| 63 | D | A | -1.7118 | |
| 64 | D | A | -1.9202 | |
| 65 | S | A | -0.4037 | |
| 66 | I | A | 0.5592 | |
| 67 | C | A | 0.0000 | |
| 68 | T | A | -0.1161 | |
| 69 | G | A | -0.6923 | |
| 70 | T | A | -1.1393 | |
| 71 | S | A | -1.4856 | |
| 72 | S | A | -1.4409 | |
| 73 | G | A | -1.1365 | |
| 74 | N | A | -1.2947 | |
| 75 | Q | A | -1.4031 | |
| 76 | V | A | 0.0000 | |
| 77 | N | A | -1.0562 | |
| 78 | L | A | 0.0000 | |
| 79 | T | A | -0.1751 | |
| 80 | I | A | 0.0000 | |
| 81 | Q | A | -0.8955 | |
| 82 | G | A | -1.2344 | |
| 83 | L | A | 0.0000 | |
| 84 | R | A | -1.6091 | |
| 85 | A | A | 0.0370 | |
| 86 | M | A | 0.5708 | |
| 87 | D | A | -0.1160 | |
| 88 | T | A | 0.4234 | |
| 89 | G | A | -0.0829 | |
| 90 | L | A | -0.0703 | |
| 91 | Y | A | 0.0000 | |
| 92 | I | A | 0.1156 | |
| 93 | C | A | 0.0000 | |
| 94 | K | A | 0.0576 | |
| 95 | V | A | 0.0000 | |
| 96 | E | A | -0.0705 | |
| 97 | A | A | 0.0000 | |
| 98 | G | A | 0.0000 | |
| 99 | C | A | -1.5741 | |
| 100 | K | A | -2.0176 | |
| 101 | N | A | -0.8875 | |
| 102 | F | A | 1.9846 | |
| 103 | F | A | 2.5047 | |
| 104 | W | A | 1.1935 | |
| 105 | K | A | -1.1273 | |
| 106 | T | A | -0.7125 | |
| 107 | F | A | -0.2390 | |
| 108 | T | A | -0.2416 | |
| 109 | S | A | -0.0151 | |
| 110 | C | A | 0.4061 | |
| 111 | G | A | 0.0000 | |
| 112 | I | A | 1.4584 | |
| 113 | G | A | 0.0000 | |
| 114 | N | A | -0.9570 | |
| 115 | G | A | 0.0000 | |
| 116 | T | A | 0.0000 | |
| 117 | Q | A | 0.3112 | |
| 118 | I | A | 0.0000 | |
| 119 | Y | A | 1.7531 | |
| 120 | V | A | 1.1526 |