Project name: query_structure

Status: done

Started: 2026-03-16 22:54:05
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Chain sequence(s) A: AMHVAQPAVVLASSRGIASFVCEYASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTSSGNQVNLTIQGLRAMDTGLYICKVEAGCKNFFWKTFTSCGIGNGTQIYV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:46)
Show buried residues

Minimal score value
-2.473
Maximal score value
2.5047
Average score
-0.3433
Total score value
-41.1972

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.1889
2 M A -0.0337
3 H A -0.7217
4 V A 0.0000
5 A A -0.4708
6 Q A -0.2205
7 P A -0.0420
8 A A 0.1471
9 V A 1.3098
10 V A 1.5627
11 L A 2.2814
12 A A 0.8314
13 S A -0.1263
14 S A -0.9142
15 R A -2.1734
16 G A 0.0000
17 I A -0.3566
18 A A 0.0000
19 S A -0.0533
20 F A 0.0000
21 V A -0.2923
22 C A 0.0000
23 E A -1.3017
24 Y A 0.0000
25 A A -0.7568
26 S A -1.0956
27 P A -0.9295
28 G A -1.3404
29 K A -2.1351
30 A A 0.0000
31 T A -0.9949
32 E A -0.9410
33 V A 0.0000
34 R A -0.6222
35 V A 0.0000
36 T A 0.0000
37 V A 0.0000
38 L A -0.2287
39 R A -0.7407
40 Q A -1.0104
41 A A -1.1288
42 D A -2.1561
43 S A -1.4660
44 Q A -1.5888
45 V A -0.2622
46 T A -0.6976
47 E A -1.5871
48 V A -0.2175
49 C A 0.0000
50 A A -0.0631
51 A A 0.0000
52 T A -0.3173
53 Y A 0.0000
54 M A -0.5122
55 M A -0.7136
56 G A -1.3121
57 N A -2.1897
58 E A -2.4730
59 L A 0.0000
60 T A -0.5226
61 F A 0.0370
62 L A 0.4521
63 D A -1.7118
64 D A -1.9202
65 S A -0.4037
66 I A 0.5592
67 C A 0.0000
68 T A -0.1161
69 G A -0.6923
70 T A -1.1393
71 S A -1.4856
72 S A -1.4409
73 G A -1.1365
74 N A -1.2947
75 Q A -1.4031
76 V A 0.0000
77 N A -1.0562
78 L A 0.0000
79 T A -0.1751
80 I A 0.0000
81 Q A -0.8955
82 G A -1.2344
83 L A 0.0000
84 R A -1.6091
85 A A 0.0370
86 M A 0.5708
87 D A -0.1160
88 T A 0.4234
89 G A -0.0829
90 L A -0.0703
91 Y A 0.0000
92 I A 0.1156
93 C A 0.0000
94 K A 0.0576
95 V A 0.0000
96 E A -0.0705
97 A A 0.0000
98 G A 0.0000
99 C A -1.5741
100 K A -2.0176
101 N A -0.8875
102 F A 1.9846
103 F A 2.5047
104 W A 1.1935
105 K A -1.1273
106 T A -0.7125
107 F A -0.2390
108 T A -0.2416
109 S A -0.0151
110 C A 0.4061
111 G A 0.0000
112 I A 1.4584
113 G A 0.0000
114 N A -0.9570
115 G A 0.0000
116 T A 0.0000
117 Q A 0.3112
118 I A 0.0000
119 Y A 1.7531
120 V A 1.1526
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Laboratory of Theory of Biopolymers 2018