| Chain sequence(s) |
A: TIVHQETSRRGPDGYSWICECSSGTYTCDADNCGNLCPSDWQLTLHCHRLDSSTYTYDWHVETW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | 1.2580 | |
| 2 | I | A | 2.4039 | |
| 3 | V | A | 1.6424 | |
| 4 | H | A | -0.7281 | |
| 5 | Q | A | -1.8341 | |
| 6 | E | A | -3.0804 | |
| 7 | T | A | -2.3479 | |
| 8 | S | A | -2.7715 | |
| 9 | R | A | -3.2539 | |
| 10 | R | A | -3.4551 | |
| 11 | G | A | -2.3879 | |
| 12 | P | A | -2.0300 | |
| 13 | D | A | -2.2050 | |
| 14 | G | A | -1.1137 | |
| 15 | Y | A | -1.0262 | |
| 16 | S | A | -0.5821 | |
| 17 | W | A | -0.7839 | |
| 18 | I | A | -0.0437 | |
| 19 | C | A | 0.0000 | |
| 20 | E | A | -0.7549 | |
| 21 | C | A | -0.5297 | |
| 22 | S | A | -0.6360 | |
| 23 | S | A | -0.4671 | |
| 24 | G | A | -0.3759 | |
| 25 | T | A | -0.1446 | |
| 26 | Y | A | 0.2719 | |
| 27 | T | A | -0.1935 | |
| 28 | C | A | -1.3048 | |
| 29 | D | A | -2.5636 | |
| 30 | A | A | -2.5652 | |
| 31 | D | A | -3.5941 | |
| 32 | N | A | -2.9530 | |
| 33 | C | A | 0.0000 | |
| 34 | G | A | -1.8654 | |
| 35 | N | A | -1.9441 | |
| 36 | L | A | -0.5954 | |
| 37 | C | A | 0.0000 | |
| 38 | P | A | -0.6169 | |
| 39 | S | A | -0.4909 | |
| 40 | D | A | -0.1798 | |
| 41 | W | A | 0.3922 | |
| 42 | Q | A | -0.8639 | |
| 43 | L | A | -0.3232 | |
| 44 | T | A | -0.4728 | |
| 45 | L | A | 0.0000 | |
| 46 | H | A | -0.2045 | |
| 47 | C | A | 0.0000 | |
| 48 | H | A | -0.4663 | |
| 49 | R | A | -1.0616 | |
| 50 | L | A | -0.0885 | |
| 51 | D | A | -1.4962 | |
| 52 | S | A | -0.8915 | |
| 53 | S | A | -0.6634 | |
| 54 | T | A | -0.2189 | |
| 55 | Y | A | 0.2358 | |
| 56 | T | A | 0.1368 | |
| 57 | Y | A | 0.0782 | |
| 58 | D | A | -1.0484 | |
| 59 | W | A | 0.0185 | |
| 60 | H | A | -0.5740 | |
| 61 | V | A | 0.6249 | |
| 62 | E | A | -0.8169 | |
| 63 | T | A | 0.1661 | |
| 64 | W | A | 0.8902 |