| Chain sequence(s) |
A: DVQLVESGGGSVQAGGSLRLSCAVSGSTYSPCTCGWYRQAPGKEREWVCSISSPGTIYYQDSVKGRFTCSRDNAKNTCYLQMNSLQREDTGMYYCQIQCGVRSIREYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:55)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.0903 | |
| 2 | V | A | -1.3294 | |
| 3 | Q | A | -1.1150 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.7874 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.5486 | |
| 8 | G | A | -1.2970 | |
| 9 | G | A | -1.1571 | |
| 10 | G | A | -0.8661 | |
| 11 | S | A | -0.6801 | |
| 12 | V | A | -0.8464 | |
| 13 | Q | A | -1.7166 | |
| 14 | A | A | -1.8638 | |
| 15 | G | A | -1.4902 | |
| 16 | G | A | -1.1228 | |
| 17 | S | A | -1.4550 | |
| 18 | L | A | -1.3694 | |
| 19 | R | A | -2.3866 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5403 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.2514 | |
| 24 | V | A | -0.3568 | |
| 25 | S | A | -0.9474 | |
| 26 | G | A | -1.1631 | |
| 27 | S | A | -0.5820 | |
| 28 | T | A | -0.2471 | |
| 29 | Y | A | 1.0421 | |
| 30 | S | A | 0.4782 | |
| 31 | P | A | 0.1041 | |
| 32 | C | A | -0.1379 | |
| 33 | T | A | -0.3570 | |
| 34 | C | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.2818 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -2.1066 | |
| 40 | A | A | -2.0756 | |
| 41 | P | A | -1.6433 | |
| 42 | G | A | -1.9843 | |
| 43 | K | A | -3.3464 | |
| 44 | E | A | -3.5201 | |
| 45 | R | A | -2.6918 | |
| 46 | E | A | -1.6899 | |
| 47 | W | A | -0.1726 | |
| 48 | V | A | 0.0000 | |
| 49 | C | A | 0.0000 | |
| 50 | S | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | S | A | 0.0187 | |
| 53 | S | A | -0.5229 | |
| 54 | P | A | -0.3497 | |
| 55 | G | A | -0.1641 | |
| 56 | T | A | 0.4238 | |
| 57 | I | A | 1.3804 | |
| 58 | Y | A | 1.3027 | |
| 59 | Y | A | -0.1083 | |
| 60 | Q | A | -1.2108 | |
| 61 | D | A | -2.4025 | |
| 62 | S | A | -1.8621 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.5155 | |
| 65 | G | A | -1.8892 | |
| 66 | R | A | -1.7181 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.8578 | |
| 69 | C | A | 0.0000 | |
| 70 | S | A | -0.6110 | |
| 71 | R | A | -1.4793 | |
| 72 | D | A | -2.1229 | |
| 73 | N | A | -2.4215 | |
| 74 | A | A | -1.8010 | |
| 75 | K | A | -2.5926 | |
| 76 | N | A | -2.1486 | |
| 77 | T | A | -1.3058 | |
| 78 | C | A | 0.0000 | |
| 79 | Y | A | 0.0000 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.7657 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -2.0293 | |
| 84 | S | A | -1.3452 | |
| 85 | L | A | 0.0000 | |
| 86 | Q | A | -2.5452 | |
| 87 | R | A | -3.0431 | |
| 88 | E | A | -2.8566 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -1.4907 | |
| 91 | G | A | 0.0000 | |
| 92 | M | A | -0.6714 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.1934 | |
| 95 | C | A | 0.0000 | |
| 96 | Q | A | 0.0000 | |
| 97 | I | A | 0.0000 | |
| 98 | Q | A | -0.8129 | |
| 99 | C | A | 0.0000 | |
| 100 | G | A | 0.2396 | |
| 101 | V | A | 0.6732 | |
| 102 | R | A | -1.0980 | |
| 103 | S | A | -0.4354 | |
| 104 | I | A | 0.4748 | |
| 105 | R | A | -1.5212 | |
| 106 | E | A | -1.5781 | |
| 107 | Y | A | -0.6555 | |
| 108 | W | A | -0.0408 | |
| 109 | G | A | -0.1165 | |
| 110 | Q | A | -0.9007 | |
| 111 | G | A | 0.0000 | |
| 112 | T | A | 0.0000 | |
| 113 | Q | A | -1.3311 | |
| 114 | V | A | 0.0000 | |
| 115 | T | A | -1.1253 | |
| 116 | V | A | 0.0000 | |
| 117 | S | A | -1.3820 | |
| 118 | S | A | -1.0663 |