Project name: query_structure

Status: done

Started: 2026-03-16 23:50:06
Settings
Chain sequence(s) A: KKKCIAKDYGRCKWGGTPCCRGRGCICSIMGTNCECKPRLIMEGLGLA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:37)
Show buried residues

Minimal score value
-3.2201
Maximal score value
2.35
Average score
-0.7163
Total score value
-34.3809

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -3.0135
2 K A -3.2201
3 K A -2.8121
4 C A -1.8822
5 I A -1.5168
6 A A -1.8746
7 K A -2.5562
8 D A -2.4593
9 Y A -0.6816
10 G A 0.0000
11 R A -2.6001
12 C A 0.0000
13 K A -1.9868
14 W A 0.0310
15 G A -0.7213
16 G A -1.2086
17 T A -1.1456
18 P A -1.3290
19 C A -1.8696
20 C A -2.0525
21 R A -2.7541
22 G A -1.6465
23 R A -1.7275
24 G A -0.6428
25 C A -0.4233
26 I A 0.4891
27 C A 0.3752
28 S A 0.9011
29 I A 2.3500
30 M A 1.5830
31 G A 0.3443
32 T A -0.3818
33 N A -1.4685
34 C A -0.8763
35 E A -1.6280
36 C A 0.0000
37 K A -1.3393
38 P A -1.4796
39 R A -1.4220
40 L A 0.6329
41 I A 1.8878
42 M A 1.2283
43 E A -0.1666
44 G A 0.4463
45 L A 1.3697
46 G A 0.6266
47 L A 1.3858
48 A A 0.8542
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Laboratory of Theory of Biopolymers 2018