| Chain sequence(s) |
A: KKKCIAKDYGRCKWGGTPCCRGRGCICSIMGTNCECKPRLIMEGLGLA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:37)
[INFO] Main: Simulation completed successfully. (00:00:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -3.0135 | |
| 2 | K | A | -3.2201 | |
| 3 | K | A | -2.8121 | |
| 4 | C | A | -1.8822 | |
| 5 | I | A | -1.5168 | |
| 6 | A | A | -1.8746 | |
| 7 | K | A | -2.5562 | |
| 8 | D | A | -2.4593 | |
| 9 | Y | A | -0.6816 | |
| 10 | G | A | 0.0000 | |
| 11 | R | A | -2.6001 | |
| 12 | C | A | 0.0000 | |
| 13 | K | A | -1.9868 | |
| 14 | W | A | 0.0310 | |
| 15 | G | A | -0.7213 | |
| 16 | G | A | -1.2086 | |
| 17 | T | A | -1.1456 | |
| 18 | P | A | -1.3290 | |
| 19 | C | A | -1.8696 | |
| 20 | C | A | -2.0525 | |
| 21 | R | A | -2.7541 | |
| 22 | G | A | -1.6465 | |
| 23 | R | A | -1.7275 | |
| 24 | G | A | -0.6428 | |
| 25 | C | A | -0.4233 | |
| 26 | I | A | 0.4891 | |
| 27 | C | A | 0.3752 | |
| 28 | S | A | 0.9011 | |
| 29 | I | A | 2.3500 | |
| 30 | M | A | 1.5830 | |
| 31 | G | A | 0.3443 | |
| 32 | T | A | -0.3818 | |
| 33 | N | A | -1.4685 | |
| 34 | C | A | -0.8763 | |
| 35 | E | A | -1.6280 | |
| 36 | C | A | 0.0000 | |
| 37 | K | A | -1.3393 | |
| 38 | P | A | -1.4796 | |
| 39 | R | A | -1.4220 | |
| 40 | L | A | 0.6329 | |
| 41 | I | A | 1.8878 | |
| 42 | M | A | 1.2283 | |
| 43 | E | A | -0.1666 | |
| 44 | G | A | 0.4463 | |
| 45 | L | A | 1.3697 | |
| 46 | G | A | 0.6266 | |
| 47 | L | A | 1.3858 | |
| 48 | A | A | 0.8542 |