| Chain sequence(s) |
B: SALAAELEALEAQAAALWAQLQQAAADPELRMKLFVEYAKVVARRLELLK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | 0.0370 | |
| 2 | A | B | 0.0516 | |
| 3 | L | B | 0.7251 | |
| 4 | A | B | -0.0164 | |
| 5 | A | B | -0.7865 | |
| 6 | E | B | -1.4511 | |
| 7 | L | B | -1.1082 | |
| 8 | E | B | -2.4345 | |
| 9 | A | B | -1.6233 | |
| 10 | L | B | 0.0000 | |
| 11 | E | B | -2.1736 | |
| 12 | A | B | -1.2790 | |
| 13 | Q | B | -1.1163 | |
| 14 | A | B | -0.7583 | |
| 15 | A | B | -0.0865 | |
| 16 | A | B | -0.1506 | |
| 17 | L | B | 0.1154 | |
| 18 | W | B | 0.4128 | |
| 19 | A | B | -0.4380 | |
| 20 | Q | B | -0.8180 | |
| 21 | L | B | -0.7222 | |
| 22 | Q | B | -1.7735 | |
| 23 | Q | B | -1.9012 | |
| 24 | A | B | 0.0000 | |
| 25 | A | B | -1.0377 | |
| 26 | A | B | -0.9986 | |
| 27 | D | B | -1.7074 | |
| 28 | P | B | -1.8347 | |
| 29 | E | B | -2.3262 | |
| 30 | L | B | -1.3130 | |
| 31 | R | B | -1.7653 | |
| 32 | M | B | -0.4315 | |
| 33 | K | B | -1.3745 | |
| 34 | L | B | 0.0000 | |
| 35 | F | B | 0.9183 | |
| 36 | V | B | 0.2706 | |
| 37 | E | B | -0.9907 | |
| 38 | Y | B | 0.1153 | |
| 39 | A | B | -0.5582 | |
| 40 | K | B | -1.8679 | |
| 41 | V | B | 0.0000 | |
| 42 | V | B | -1.0602 | |
| 43 | A | B | -1.3715 | |
| 44 | R | B | -2.5531 | |
| 45 | R | B | -1.7878 | |
| 46 | L | B | -0.3481 | |
| 47 | E | B | -1.8976 | |
| 48 | L | B | -0.4070 | |
| 49 | L | B | 0.5658 | |
| 50 | K | B | -1.4525 |