| Chain sequence(s) |
B: ELRALMDEAMKAIKKLKELKELVEKQNPDEELAKRLDEKLKKLEEKVKAL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:13)
[INFO] Main: Simulation completed successfully. (00:03:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | B | -1.7357 | |
| 2 | L | B | -0.5548 | |
| 3 | R | B | -2.0525 | |
| 4 | A | B | -1.5837 | |
| 5 | L | B | -0.5917 | |
| 6 | M | B | -1.5877 | |
| 7 | D | B | -3.1484 | |
| 8 | E | B | -3.0639 | |
| 9 | A | B | -2.3522 | |
| 10 | M | B | -2.5438 | |
| 11 | K | B | -3.4815 | |
| 12 | A | B | -2.6415 | |
| 13 | I | B | 0.0000 | |
| 14 | K | B | -3.5653 | |
| 15 | K | B | -2.9743 | |
| 16 | L | B | -1.5091 | |
| 17 | K | B | -2.7212 | |
| 18 | E | B | -2.7902 | |
| 19 | L | B | -1.0369 | |
| 20 | K | B | -1.6831 | |
| 21 | E | B | -2.4175 | |
| 22 | L | B | -1.2432 | |
| 23 | V | B | -1.5884 | |
| 24 | E | B | -3.6876 | |
| 25 | K | B | -3.2155 | |
| 26 | Q | B | -2.8521 | |
| 27 | N | B | -2.9508 | |
| 28 | P | B | -3.0137 | |
| 29 | D | B | -4.0181 | |
| 30 | E | B | -4.3094 | |
| 31 | E | B | -4.0036 | |
| 32 | L | B | -3.1632 | |
| 33 | A | B | 0.0000 | |
| 34 | K | B | -4.7579 | |
| 35 | R | B | -4.6601 | |
| 36 | L | B | -3.5582 | |
| 37 | D | B | -3.9583 | |
| 38 | E | B | -4.9062 | |
| 39 | K | B | -4.4998 | |
| 40 | L | B | 0.0000 | |
| 41 | K | B | -4.9634 | |
| 42 | K | B | -4.9243 | |
| 43 | L | B | -3.5003 | |
| 44 | E | B | -4.0920 | |
| 45 | E | B | -4.3082 | |
| 46 | K | B | -3.4412 | |
| 47 | V | B | 0.0000 | |
| 48 | K | B | -2.6337 | |
| 49 | A | B | -1.2258 | |
| 50 | L | B | 0.3467 |