Project name: G3G3

Status: done

Started: 2025-06-25 14:04:15
Settings
Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCAASGFTFSSSQLSWFRQAPGKEREFVSAVTLVSRTHYADSVKGRFTISRDDAKNTLYLQMNSLKPEDTAVYYCVARAAWGTDYREQGYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:29)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:30)
Show buried residues

Minimal score value
-2.7841
Maximal score value
1.5106
Average score
-0.6629
Total score value
-80.2118

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.9340
2 V H -0.9049
3 Q H -0.8862
4 L H 0.0000
5 L H 0.9572
6 E H -0.0219
7 S H -0.4395
8 G H -0.9221
9 G H -0.5229
11 G H 0.2146
12 L H 1.1215
13 V H -0.0197
14 Q H -1.3740
15 P H -1.6527
16 G H -1.4398
17 G H -0.9739
18 S H -1.0575
19 L H -0.5010
20 R H -1.2541
21 L H 0.0000
22 S H -0.2023
23 C H 0.0000
24 A H -0.2861
25 A H 0.0000
26 S H -0.7837
27 G H -0.9984
28 F H -0.3141
29 T H -0.2650
30 F H 0.0000
35 S H -0.1542
36 S H 0.3655
37 S H 0.0000
38 Q H 0.1361
39 L H 0.0000
40 S H 0.0000
41 W H 0.0000
42 F H 0.4085
43 R H 0.0000
44 Q H -1.2949
45 A H -1.4047
46 P H -1.0574
47 G H -1.4778
48 K H -2.2849
49 E H -2.7841
50 R H -1.8139
51 E H -1.0584
52 F H 0.0592
53 V H 0.0000
54 S H 0.0000
55 A H -0.3904
56 V H 0.0000
57 T H 0.1406
58 L H 1.1650
59 V H 1.5106
63 S H -0.1124
64 R H -1.4069
65 T H -0.9500
66 H H -1.3768
67 Y H -1.0438
68 A H -1.2953
69 D H -2.5270
70 S H -1.7505
71 V H 0.0000
72 K H -2.7565
74 G H -1.8086
75 R H -1.6037
76 F H 0.0000
77 T H -0.7890
78 I H 0.0000
79 S H -0.6508
80 R H -1.0709
81 D H -1.9761
82 D H -2.0009
83 A H -1.6373
84 K H -2.5920
85 N H -2.2063
86 T H -1.3040
87 L H 0.0000
88 Y H -0.3122
89 L H 0.0000
90 Q H -0.7801
91 M H 0.0000
92 N H -1.2995
93 S H -1.3570
94 L H 0.0000
95 K H -2.5445
96 P H -1.9625
97 E H -2.3574
98 D H 0.0000
99 T H -0.8473
100 A H 0.0000
101 V H -0.1762
102 Y H 0.0000
103 Y H 0.2100
104 C H 0.0000
105 V H 0.0000
106 A H 0.0000
107 R H 0.0000
108 A H -0.4868
109 A H -0.5557
110 W H -0.2269
111 G H -0.6878
111A T H -0.8382
112A D H -1.8443
112 Y H -0.6576
113 R H -2.0797
114 E H -1.5719
115 Q H -1.4056
116 G H -0.4215
117 Y H 0.4685
118 W H 0.8347
119 G H 0.1388
120 Q H -0.9229
121 G H -0.4134
122 T H -0.5853
123 Q H -0.6994
124 V H 0.0000
125 T H -0.2151
126 V H 0.0000
127 S H -0.7306
128 S H -0.6299
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Laboratory of Theory of Biopolymers 2018