Project name: P2B11

Status: done

Started: 2026-07-29 08:58:33
Settings
Chain sequence(s) H: EVQLQQPGAELLKPGASLKLSCKASGYIFTNYWMHWVKQRPGRGLEWIGRIDPDTGDTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARRAYYSKDALDYWGQGTSVTVSA
L: DIVLTQSPASLAVSLGQRATISCRASESIDNYGISFMHWYQQKPGQPPKLLIYRASNLDSGIPARFSGSGSRTDFTLTINPVETDDVATYYCQQNNKDPWTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:48)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:49)
Show buried residues

Minimal score value
-3.7135
Maximal score value
1.5835
Average score
-0.6452
Total score value
-149.0323

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1583
2 V H -1.1727
3 Q H -2.0691
4 L H 0.0000
5 Q H -2.0428
6 Q H 0.0000
7 P H -0.8699
8 G H -0.8646
9 A H -0.0640
11 E H 0.1840
12 L H 1.1138
13 L H -0.0074
14 K H -1.4856
15 P H -1.2567
16 G H -1.0807
17 A H -0.8679
18 S H -0.9652
19 L H 0.0000
20 K H -1.2932
21 L H 0.0000
22 S H -0.6022
23 C H 0.0000
24 K H -1.5332
25 A H 0.0000
26 S H -0.9835
27 G H -0.8151
28 Y H 0.3015
29 I H 1.5835
30 F H 0.0000
35 T H -0.6881
36 N H -0.5258
37 Y H 0.2421
38 W H -0.2825
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 K H 0.0000
44 Q H -0.9845
45 R H -1.6328
46 P H -1.2427
47 G H -1.6532
48 R H -2.5246
49 G H -1.4972
50 L H 0.0000
51 E H -1.0412
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 R H -0.7356
56 I H 0.0000
57 D H 0.0000
58 P H 0.0000
59 D H -2.2144
62 T H -1.1807
63 G H -1.2260
64 D H -1.4106
65 T H -1.0945
66 K H -1.7372
67 Y H -1.9141
68 N H -2.6397
69 E H -3.7135
70 K H -3.1994
71 F H 0.0000
72 K H -3.0975
74 S H -1.7690
75 K H -1.4906
76 A H 0.0000
77 T H -0.7050
78 L H 0.0000
79 T H -0.3404
80 V H -0.4938
81 D H -1.1508
82 K H -1.4662
83 P H -0.8868
84 S H -0.7842
85 S H -0.5712
86 T H 0.0000
87 A H 0.0000
88 Y H -0.2105
89 M H 0.0000
90 Q H -1.0301
91 L H 0.0000
92 S H -0.7592
93 S H -0.8294
94 L H 0.0000
95 T H -1.2240
96 S H -1.3768
97 E H -1.9980
98 D H 0.0000
99 S H -0.6080
100 A H 0.0000
101 V H -0.0132
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 R H 0.1172
108 A H 0.0000
109 Y H 1.0073
110 Y H 1.3137
111 S H 0.4069
112 K H 0.0336
113 D H 0.0782
114 A H 0.0000
115 L H 0.0000
116 D H -0.3527
117 Y H 0.0250
118 W H -0.5962
119 G H 0.0000
120 Q H -1.6257
121 G H 0.0000
122 T H 0.0000
123 S H -0.1486
124 V H 0.0000
125 T H 0.0283
126 V H -0.4746
127 S H -0.3099
128 A H -0.3413
1 D L -2.0939
2 I L 0.0000
3 V L 0.6843
4 L L 0.0000
5 T L -0.6035
6 Q L -0.6768
7 S L -0.6450
8 P L -0.3917
9 A L -0.4140
10 S L -0.6298
11 L L -0.3966
12 A L -0.5109
13 V L 0.0000
14 S L -1.1393
15 L L -0.4429
16 G L -1.3667
17 Q L -2.5114
18 R L -2.8289
19 A L 0.0000
20 T L -0.6436
21 I L 0.0000
22 S L -0.8925
23 C L 0.0000
24 R L -2.5438
25 A L 0.0000
26 S L -1.0036
27 E L -1.9125
28 S L -1.9820
29 I L 0.0000
30 D L -1.0974
31 N L -0.5814
34 Y L 0.9233
35 G L -0.0142
36 I L 0.2875
37 S L 0.0000
38 F L -0.3459
39 M L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.8977
44 Q L -1.2100
45 K L -1.4818
46 P L -1.0506
47 G L -1.4097
48 Q L -2.0827
49 P L -1.3545
50 P L 0.0000
51 K L -1.6489
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.3200
56 R L -0.4020
57 A L 0.0000
65 S L -0.6002
66 N L -0.6727
67 L L -0.1033
68 D L -0.5410
69 S L -0.5098
70 G L -0.5813
71 I L 0.0000
72 P L -0.2942
74 A L -0.2700
75 R L -0.8579
76 F L 0.0000
77 S L -0.4378
78 G L -0.4593
79 S L -0.8171
80 G L -1.4807
83 S L -1.7281
84 R L -2.8079
85 T L -2.4704
86 D L -2.4655
87 F L 0.0000
88 T L -0.7977
89 L L 0.0000
90 T L -0.7931
91 I L 0.0000
92 N L -2.0271
93 P L -1.7840
94 V L 0.0000
95 E L -1.6511
96 T L -1.2166
97 D L -1.8844
98 D L 0.0000
99 V L -0.5568
100 A L 0.0000
101 T L -0.7166
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 N L 0.0000
108 N L -1.0591
109 K L -1.9853
114 D L -2.1884
115 P L -2.0825
116 W L 0.0000
117 T L -0.3049
118 F L 0.2160
119 G L 0.0000
120 G L -0.7226
121 G L -0.8767
122 T L 0.0000
123 K L -1.1004
124 L L 0.0000
125 E L -1.1624
126 I L -0.6229
127 K L -1.4984
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Laboratory of Theory of Biopolymers 2018