| Chain sequence(s) |
H: EVQLQQPGAELLKPGASLKLSCKASGYIFTNYWMHWVKQRPGRGLEWIGRIDPDTGDTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARRAYYSKDALDYWGQGTSVTVSA
L: DIVLTQSPASLAVSLGQRATISCRASESIDNYGISFMHWYQQKPGQPPKLLIYRASNLDSGIPARFSGSGSRTDFTLTINPVETDDVATYYCQQNNKDPWTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:48)
[INFO] Main: Simulation completed successfully. (00:01:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -2.1583 | |
| 2 | V | H | -1.1727 | |
| 3 | Q | H | -2.0691 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.0428 | |
| 6 | Q | H | 0.0000 | |
| 7 | P | H | -0.8699 | |
| 8 | G | H | -0.8646 | |
| 9 | A | H | -0.0640 | |
| 11 | E | H | 0.1840 | |
| 12 | L | H | 1.1138 | |
| 13 | L | H | -0.0074 | |
| 14 | K | H | -1.4856 | |
| 15 | P | H | -1.2567 | |
| 16 | G | H | -1.0807 | |
| 17 | A | H | -0.8679 | |
| 18 | S | H | -0.9652 | |
| 19 | L | H | 0.0000 | |
| 20 | K | H | -1.2932 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.6022 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.5332 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.9835 | |
| 27 | G | H | -0.8151 | |
| 28 | Y | H | 0.3015 | |
| 29 | I | H | 1.5835 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.6881 | |
| 36 | N | H | -0.5258 | |
| 37 | Y | H | 0.2421 | |
| 38 | W | H | -0.2825 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.9845 | |
| 45 | R | H | -1.6328 | |
| 46 | P | H | -1.2427 | |
| 47 | G | H | -1.6532 | |
| 48 | R | H | -2.5246 | |
| 49 | G | H | -1.4972 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0412 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | R | H | -0.7356 | |
| 56 | I | H | 0.0000 | |
| 57 | D | H | 0.0000 | |
| 58 | P | H | 0.0000 | |
| 59 | D | H | -2.2144 | |
| 62 | T | H | -1.1807 | |
| 63 | G | H | -1.2260 | |
| 64 | D | H | -1.4106 | |
| 65 | T | H | -1.0945 | |
| 66 | K | H | -1.7372 | |
| 67 | Y | H | -1.9141 | |
| 68 | N | H | -2.6397 | |
| 69 | E | H | -3.7135 | |
| 70 | K | H | -3.1994 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.0975 | |
| 74 | S | H | -1.7690 | |
| 75 | K | H | -1.4906 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7050 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.3404 | |
| 80 | V | H | -0.4938 | |
| 81 | D | H | -1.1508 | |
| 82 | K | H | -1.4662 | |
| 83 | P | H | -0.8868 | |
| 84 | S | H | -0.7842 | |
| 85 | S | H | -0.5712 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2105 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -1.0301 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.7592 | |
| 93 | S | H | -0.8294 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -1.2240 | |
| 96 | S | H | -1.3768 | |
| 97 | E | H | -1.9980 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.6080 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.0132 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | R | H | 0.1172 | |
| 108 | A | H | 0.0000 | |
| 109 | Y | H | 1.0073 | |
| 110 | Y | H | 1.3137 | |
| 111 | S | H | 0.4069 | |
| 112 | K | H | 0.0336 | |
| 113 | D | H | 0.0782 | |
| 114 | A | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -0.3527 | |
| 117 | Y | H | 0.0250 | |
| 118 | W | H | -0.5962 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.6257 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.0000 | |
| 123 | S | H | -0.1486 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.0283 | |
| 126 | V | H | -0.4746 | |
| 127 | S | H | -0.3099 | |
| 128 | A | H | -0.3413 | |
| 1 | D | L | -2.0939 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6843 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.6035 | |
| 6 | Q | L | -0.6768 | |
| 7 | S | L | -0.6450 | |
| 8 | P | L | -0.3917 | |
| 9 | A | L | -0.4140 | |
| 10 | S | L | -0.6298 | |
| 11 | L | L | -0.3966 | |
| 12 | A | L | -0.5109 | |
| 13 | V | L | 0.0000 | |
| 14 | S | L | -1.1393 | |
| 15 | L | L | -0.4429 | |
| 16 | G | L | -1.3667 | |
| 17 | Q | L | -2.5114 | |
| 18 | R | L | -2.8289 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6436 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.8925 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.5438 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.0036 | |
| 27 | E | L | -1.9125 | |
| 28 | S | L | -1.9820 | |
| 29 | I | L | 0.0000 | |
| 30 | D | L | -1.0974 | |
| 31 | N | L | -0.5814 | |
| 34 | Y | L | 0.9233 | |
| 35 | G | L | -0.0142 | |
| 36 | I | L | 0.2875 | |
| 37 | S | L | 0.0000 | |
| 38 | F | L | -0.3459 | |
| 39 | M | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.8977 | |
| 44 | Q | L | -1.2100 | |
| 45 | K | L | -1.4818 | |
| 46 | P | L | -1.0506 | |
| 47 | G | L | -1.4097 | |
| 48 | Q | L | -2.0827 | |
| 49 | P | L | -1.3545 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.6489 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.3200 | |
| 56 | R | L | -0.4020 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.6002 | |
| 66 | N | L | -0.6727 | |
| 67 | L | L | -0.1033 | |
| 68 | D | L | -0.5410 | |
| 69 | S | L | -0.5098 | |
| 70 | G | L | -0.5813 | |
| 71 | I | L | 0.0000 | |
| 72 | P | L | -0.2942 | |
| 74 | A | L | -0.2700 | |
| 75 | R | L | -0.8579 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.4378 | |
| 78 | G | L | -0.4593 | |
| 79 | S | L | -0.8171 | |
| 80 | G | L | -1.4807 | |
| 83 | S | L | -1.7281 | |
| 84 | R | L | -2.8079 | |
| 85 | T | L | -2.4704 | |
| 86 | D | L | -2.4655 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7977 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.7931 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -2.0271 | |
| 93 | P | L | -1.7840 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.6511 | |
| 96 | T | L | -1.2166 | |
| 97 | D | L | -1.8844 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.5568 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.7166 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | N | L | 0.0000 | |
| 108 | N | L | -1.0591 | |
| 109 | K | L | -1.9853 | |
| 114 | D | L | -2.1884 | |
| 115 | P | L | -2.0825 | |
| 116 | W | L | 0.0000 | |
| 117 | T | L | -0.3049 | |
| 118 | F | L | 0.2160 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.7226 | |
| 121 | G | L | -0.8767 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.1004 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.1624 | |
| 126 | I | L | -0.6229 | |
| 127 | K | L | -1.4984 |