| Chain sequence(s) |
A: CIPSGQPCPYNENCCSQSCTGGRCD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.3431 | |
| 2 | I | A | -0.3208 | |
| 3 | P | A | -0.9463 | |
| 4 | S | A | -1.6787 | |
| 5 | G | A | -1.7097 | |
| 6 | Q | A | -1.9188 | |
| 7 | P | A | -1.8421 | |
| 8 | C | A | -1.8245 | |
| 9 | P | A | -0.7484 | |
| 10 | Y | A | -0.7186 | |
| 11 | N | A | -2.4844 | |
| 12 | E | A | -2.9680 | |
| 13 | N | A | -2.2380 | |
| 14 | C | A | 0.0000 | |
| 15 | C | A | -0.5778 | |
| 16 | S | A | -1.4801 | |
| 17 | Q | A | -2.5569 | |
| 18 | S | A | -2.3182 | |
| 19 | C | A | -2.4081 | |
| 20 | T | A | -1.6699 | |
| 21 | G | A | -1.4908 | |
| 22 | G | A | -1.8256 | |
| 23 | R | A | -2.8841 | |
| 24 | C | A | 0.0000 | |
| 25 | D | A | -2.7858 |