| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDFYVITYGETGSGWFPGQTFEVPGSKSTATISGLKPGVDYTITVYTYGYSSLGPGSPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.6148 | |
| 2 | S | A | 0.1643 | |
| 3 | D | A | -0.5753 | |
| 4 | V | A | -0.8494 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -3.4701 | |
| 7 | D | A | -3.5194 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -2.1400 | |
| 10 | V | A | 0.1315 | |
| 11 | V | A | 1.5594 | |
| 12 | A | A | 0.9090 | |
| 13 | A | A | 0.3322 | |
| 14 | T | A | -0.3376 | |
| 15 | P | A | -1.0722 | |
| 16 | T | A | -0.9642 | |
| 17 | S | A | -0.5202 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7628 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -1.1855 | |
| 22 | W | A | 0.0000 | |
| 23 | D | A | -3.3400 | |
| 24 | A | A | -1.7347 | |
| 25 | P | A | -0.6232 | |
| 26 | A | A | 0.1806 | |
| 27 | V | A | 0.5735 | |
| 28 | T | A | 0.1567 | |
| 29 | V | A | -0.2003 | |
| 30 | D | A | -0.5944 | |
| 31 | F | A | -0.5689 | |
| 32 | Y | A | 0.0000 | |
| 33 | V | A | -0.2012 | |
| 34 | I | A | 0.0000 | |
| 35 | T | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | -0.5554 | |
| 38 | E | A | -1.5172 | |
| 39 | T | A | -1.1821 | |
| 40 | G | A | -0.6443 | |
| 41 | S | A | -0.1673 | |
| 42 | G | A | 0.3159 | |
| 43 | W | A | 1.5325 | |
| 44 | F | A | 1.9429 | |
| 45 | P | A | 0.9462 | |
| 46 | G | A | 0.1486 | |
| 47 | Q | A | -0.5269 | |
| 48 | T | A | -0.5961 | |
| 49 | F | A | -0.4794 | |
| 50 | E | A | -1.3791 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.2281 | |
| 53 | G | A | -1.1597 | |
| 54 | S | A | -1.2320 | |
| 55 | K | A | -2.1451 | |
| 56 | S | A | -1.4323 | |
| 57 | T | A | -0.7826 | |
| 58 | A | A | 0.0000 | |
| 59 | T | A | 0.2455 | |
| 60 | I | A | 0.0000 | |
| 61 | S | A | -0.6552 | |
| 62 | G | A | -1.0209 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.4273 | |
| 65 | P | A | -1.6529 | |
| 66 | G | A | -1.4436 | |
| 67 | V | A | -1.6954 | |
| 68 | D | A | -2.7332 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | -1.2094 | |
| 71 | I | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | 0.0000 | |
| 74 | Y | A | -0.0421 | |
| 75 | T | A | 0.0000 | |
| 76 | Y | A | 0.1321 | |
| 77 | G | A | 0.3434 | |
| 78 | Y | A | 1.1297 | |
| 79 | S | A | 0.5935 | |
| 80 | S | A | 0.5946 | |
| 81 | L | A | 1.3126 | |
| 82 | G | A | 0.2666 | |
| 83 | P | A | -0.1954 | |
| 84 | G | A | -0.2320 | |
| 85 | S | A | -0.4610 | |
| 86 | P | A | -0.3496 | |
| 87 | I | A | -0.3527 | |
| 88 | S | A | -0.5742 | |
| 89 | I | A | -0.7555 | |
| 90 | N | A | -1.9104 | |
| 91 | Y | A | -1.6547 | |
| 92 | R | A | -2.7747 | |
| 93 | T | A | -1.7268 |