Project name: query_structure

Status: done

Started: 2026-03-17 01:10:19
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Chain sequence(s) A: VSDVPRDLEVVAATPTSLLISWDAPAVTVDFYVITYGETGSGWFPGQTFEVPGSKSTATISGLKPGVDYTITVYTYGYSSLGPGSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:33)
Show buried residues

Minimal score value
-3.5194
Maximal score value
1.9429
Average score
-0.4828
Total score value
-44.9023

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.6148
2 S A 0.1643
3 D A -0.5753
4 V A -0.8494
5 P A 0.0000
6 R A -3.4701
7 D A -3.5194
8 L A 0.0000
9 E A -2.1400
10 V A 0.1315
11 V A 1.5594
12 A A 0.9090
13 A A 0.3322
14 T A -0.3376
15 P A -1.0722
16 T A -0.9642
17 S A -0.5202
18 L A 0.0000
19 L A 0.7628
20 I A 0.0000
21 S A -1.1855
22 W A 0.0000
23 D A -3.3400
24 A A -1.7347
25 P A -0.6232
26 A A 0.1806
27 V A 0.5735
28 T A 0.1567
29 V A -0.2003
30 D A -0.5944
31 F A -0.5689
32 Y A 0.0000
33 V A -0.2012
34 I A 0.0000
35 T A 0.0000
36 Y A 0.0000
37 G A -0.5554
38 E A -1.5172
39 T A -1.1821
40 G A -0.6443
41 S A -0.1673
42 G A 0.3159
43 W A 1.5325
44 F A 1.9429
45 P A 0.9462
46 G A 0.1486
47 Q A -0.5269
48 T A -0.5961
49 F A -0.4794
50 E A -1.3791
51 V A 0.0000
52 P A -1.2281
53 G A -1.1597
54 S A -1.2320
55 K A -2.1451
56 S A -1.4323
57 T A -0.7826
58 A A 0.0000
59 T A 0.2455
60 I A 0.0000
61 S A -0.6552
62 G A -1.0209
63 L A 0.0000
64 K A -2.4273
65 P A -1.6529
66 G A -1.4436
67 V A -1.6954
68 D A -2.7332
69 Y A 0.0000
70 T A -1.2094
71 I A 0.0000
72 T A 0.0000
73 V A 0.0000
74 Y A -0.0421
75 T A 0.0000
76 Y A 0.1321
77 G A 0.3434
78 Y A 1.1297
79 S A 0.5935
80 S A 0.5946
81 L A 1.3126
82 G A 0.2666
83 P A -0.1954
84 G A -0.2320
85 S A -0.4610
86 P A -0.3496
87 I A -0.3527
88 S A -0.5742
89 I A -0.7555
90 N A -1.9104
91 Y A -1.6547
92 R A -2.7747
93 T A -1.7268
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Laboratory of Theory of Biopolymers 2018