Project name: query_structure

Status: done

Started: 2026-03-16 19:57:42
Settings
Chain sequence(s) A: CGPGRFQCESGQCIPATWVCDGENDCVDDSDEKSCATTAPTCPANQFQCGNGRCIPPAWLCDGVNDCGDGSDESQLCAATGPT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:50)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:51)
Show buried residues

Minimal score value
-3.3762
Maximal score value
0.7089
Average score
-0.8857
Total score value
-73.516

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A -0.2872
2 G A -0.7692
3 P A -0.8665
4 G A -1.2198
5 R A -1.4258
6 F A -0.8680
7 Q A -1.7656
8 C A 0.0000
9 E A -2.6301
10 S A -1.5953
11 G A -1.4544
12 Q A -1.3189
13 C A -0.9721
14 I A 0.0000
15 P A -0.4038
16 A A -0.4822
17 T A -0.1529
18 W A -0.5239
19 V A -1.0453
20 C A -1.6589
21 D A -2.5232
22 G A -2.4611
23 E A -3.3762
24 N A -3.0137
25 D A -1.7433
26 C A 0.0000
27 V A 0.2759
28 D A -1.4805
29 D A -2.4054
30 S A 0.0000
31 D A 0.0000
32 E A -2.5963
33 K A -2.5673
34 S A -1.1121
35 C A -0.8486
36 A A -0.4537
37 T A -0.2684
38 T A -0.0463
39 A A -0.1796
40 P A -0.8237
41 T A -0.5568
42 C A 0.0000
43 P A -0.8701
44 A A -0.8946
45 N A -1.6404
46 Q A -1.2517
47 F A -0.5949
48 Q A -1.2448
49 C A 0.0000
50 G A -1.8218
51 N A -2.4452
52 G A -1.8028
53 R A -2.0985
54 C A -1.0451
55 I A 0.0000
56 P A -0.3704
57 P A -0.3060
58 A A 0.0915
59 W A 0.6121
60 L A 0.6104
61 C A 0.3992
62 D A -0.2617
63 G A -0.1241
64 V A 0.7089
65 N A -1.1203
66 D A -0.8436
67 C A 0.0000
68 G A -1.9032
69 D A -2.5908
70 G A -1.5902
71 S A -1.5173
72 D A 0.0000
73 E A -0.6615
74 S A -0.8313
75 Q A -0.8181
76 L A 0.2597
77 C A -0.0262
78 A A -0.2684
79 A A -0.1184
80 T A -0.2133
81 G A -0.4935
82 P A -0.5092
83 T A -0.3002
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Laboratory of Theory of Biopolymers 2018