| Chain sequence(s) |
A: CGPGRFQCESGQCIPATWVCDGENDCVDDSDEKSCATTAPTCPANQFQCGNGRCIPPAWLCDGVNDCGDGSDESQLCAATGPT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:50)
[INFO] Main: Simulation completed successfully. (00:00:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | -0.2872 | |
| 2 | G | A | -0.7692 | |
| 3 | P | A | -0.8665 | |
| 4 | G | A | -1.2198 | |
| 5 | R | A | -1.4258 | |
| 6 | F | A | -0.8680 | |
| 7 | Q | A | -1.7656 | |
| 8 | C | A | 0.0000 | |
| 9 | E | A | -2.6301 | |
| 10 | S | A | -1.5953 | |
| 11 | G | A | -1.4544 | |
| 12 | Q | A | -1.3189 | |
| 13 | C | A | -0.9721 | |
| 14 | I | A | 0.0000 | |
| 15 | P | A | -0.4038 | |
| 16 | A | A | -0.4822 | |
| 17 | T | A | -0.1529 | |
| 18 | W | A | -0.5239 | |
| 19 | V | A | -1.0453 | |
| 20 | C | A | -1.6589 | |
| 21 | D | A | -2.5232 | |
| 22 | G | A | -2.4611 | |
| 23 | E | A | -3.3762 | |
| 24 | N | A | -3.0137 | |
| 25 | D | A | -1.7433 | |
| 26 | C | A | 0.0000 | |
| 27 | V | A | 0.2759 | |
| 28 | D | A | -1.4805 | |
| 29 | D | A | -2.4054 | |
| 30 | S | A | 0.0000 | |
| 31 | D | A | 0.0000 | |
| 32 | E | A | -2.5963 | |
| 33 | K | A | -2.5673 | |
| 34 | S | A | -1.1121 | |
| 35 | C | A | -0.8486 | |
| 36 | A | A | -0.4537 | |
| 37 | T | A | -0.2684 | |
| 38 | T | A | -0.0463 | |
| 39 | A | A | -0.1796 | |
| 40 | P | A | -0.8237 | |
| 41 | T | A | -0.5568 | |
| 42 | C | A | 0.0000 | |
| 43 | P | A | -0.8701 | |
| 44 | A | A | -0.8946 | |
| 45 | N | A | -1.6404 | |
| 46 | Q | A | -1.2517 | |
| 47 | F | A | -0.5949 | |
| 48 | Q | A | -1.2448 | |
| 49 | C | A | 0.0000 | |
| 50 | G | A | -1.8218 | |
| 51 | N | A | -2.4452 | |
| 52 | G | A | -1.8028 | |
| 53 | R | A | -2.0985 | |
| 54 | C | A | -1.0451 | |
| 55 | I | A | 0.0000 | |
| 56 | P | A | -0.3704 | |
| 57 | P | A | -0.3060 | |
| 58 | A | A | 0.0915 | |
| 59 | W | A | 0.6121 | |
| 60 | L | A | 0.6104 | |
| 61 | C | A | 0.3992 | |
| 62 | D | A | -0.2617 | |
| 63 | G | A | -0.1241 | |
| 64 | V | A | 0.7089 | |
| 65 | N | A | -1.1203 | |
| 66 | D | A | -0.8436 | |
| 67 | C | A | 0.0000 | |
| 68 | G | A | -1.9032 | |
| 69 | D | A | -2.5908 | |
| 70 | G | A | -1.5902 | |
| 71 | S | A | -1.5173 | |
| 72 | D | A | 0.0000 | |
| 73 | E | A | -0.6615 | |
| 74 | S | A | -0.8313 | |
| 75 | Q | A | -0.8181 | |
| 76 | L | A | 0.2597 | |
| 77 | C | A | -0.0262 | |
| 78 | A | A | -0.2684 | |
| 79 | A | A | -0.1184 | |
| 80 | T | A | -0.2133 | |
| 81 | G | A | -0.4935 | |
| 82 | P | A | -0.5092 | |
| 83 | T | A | -0.3002 |