| Chain sequence(s) |
A: GIPCGESCVWIPCISSAIGCSCKSKVCYRN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4548 | |
| 2 | I | A | 1.0494 | |
| 3 | P | A | 0.3035 | |
| 4 | C | A | 0.6317 | |
| 5 | G | A | 0.1522 | |
| 6 | E | A | 0.5493 | |
| 7 | S | A | 0.4159 | |
| 8 | C | A | 0.6269 | |
| 9 | V | A | 1.6828 | |
| 10 | W | A | 2.1871 | |
| 11 | I | A | 2.1273 | |
| 12 | P | A | 1.4133 | |
| 13 | C | A | 1.5813 | |
| 14 | I | A | 2.2491 | |
| 15 | S | A | 1.3014 | |
| 16 | S | A | 1.0366 | |
| 17 | A | A | 1.3129 | |
| 18 | I | A | 1.9636 | |
| 19 | G | A | 0.3593 | |
| 20 | C | A | 0.0000 | |
| 21 | S | A | -0.1987 | |
| 22 | C | A | -0.3802 | |
| 23 | K | A | -1.5734 | |
| 24 | S | A | -1.4433 | |
| 25 | K | A | -1.6044 | |
| 26 | V | A | -0.3378 | |
| 27 | C | A | 0.0000 | |
| 28 | Y | A | -0.3494 | |
| 29 | R | A | -0.4843 | |
| 30 | N | A | -1.1560 |