Project name: query_structure

Status: done

Started: 2025-11-29 10:13:50
Settings
Chain sequence(s) A: GIPCGESCVWIPCISSAIGCSCKSKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:12)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:13)
Show buried residues

Minimal score value
-1.6044
Maximal score value
2.2491
Average score
0.432
Total score value
12.9613

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4548
2 I A 1.0494
3 P A 0.3035
4 C A 0.6317
5 G A 0.1522
6 E A 0.5493
7 S A 0.4159
8 C A 0.6269
9 V A 1.6828
10 W A 2.1871
11 I A 2.1273
12 P A 1.4133
13 C A 1.5813
14 I A 2.2491
15 S A 1.3014
16 S A 1.0366
17 A A 1.3129
18 I A 1.9636
19 G A 0.3593
20 C A 0.0000
21 S A -0.1987
22 C A -0.3802
23 K A -1.5734
24 S A -1.4433
25 K A -1.6044
26 V A -0.3378
27 C A 0.0000
28 Y A -0.3494
29 R A -0.4843
30 N A -1.1560
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Laboratory of Theory of Biopolymers 2018