Project name: comprehensive_iter1

Status: done

Started: 2025-12-30 23:58:58
Settings
Chain sequence(s) A: GIVEQCCTSICSLDQLEDYCNDKDHELCGSHLVEALYLVCGERGFFYTPKK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:59)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:59)
Show buried residues

Minimal score value
-4.5983
Maximal score value
2.8317
Average score
-1.0983
Total score value
-56.0108

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.1457
2 I A -0.8784
3 V A 0.0000
4 E A -2.0636
5 Q A -1.4547
6 C A 0.0000
7 C A 0.0000
8 T A -0.4201
9 S A 0.8518
10 I A 2.7981
11 C A 0.0000
12 S A -0.4202
13 L A -1.6422
14 D A -3.0307
15 Q A -2.2579
16 L A -1.6788
17 E A -3.3189
18 D A -3.9679
19 Y A -2.9669
20 C A -3.0382
21 N A -3.9538
22 D A -4.5983
23 K A -4.3442
24 D A -3.9566
25 H A -3.3112
26 E A -3.0073
27 L A -1.4397
28 C A -1.1210
29 G A -0.8815
30 S A -0.9207
31 H A -1.4995
32 L A 0.0000
33 V A 0.3010
34 E A -0.7482
35 A A 0.2208
36 L A 0.0000
37 Y A 1.2508
38 L A 1.9511
39 V A 1.0698
40 C A 0.0000
41 G A -0.6843
42 E A -2.4246
43 R A -2.3351
44 G A -0.5631
45 F A 1.2014
46 F A 2.8317
47 Y A 2.0371
48 T A 0.1860
49 P A -1.2590
50 K A -2.7884
51 K A -2.5897
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Laboratory of Theory of Biopolymers 2018