Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | C |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | GC10C,YN95C,WL47C |
Energy difference between WT (input) and mutated protein (by FoldX) | 6.81701 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:24) [INFO] FoldX: Starting FoldX energy minimalization (00:00:43) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05) [INFO] Main: Simulation completed successfully. (00:01:06) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | E | C | -2.0068 | |
2 | V | C | -0.9367 | |
3 | Q | C | -1.2709 | |
4 | L | C | 0.0000 | |
5 | V | C | 0.4993 | |
6 | E | C | 0.1489 | |
7 | S | C | -0.2827 | |
8 | G | C | -0.5621 | |
9 | G | C | 0.5592 | |
10 | C | C | 1.8873 | mutated: GC10C |
11 | L | C | 1.8976 | |
12 | V | C | 0.1685 | |
13 | Q | C | -1.3483 | |
14 | P | C | -1.4944 | |
15 | G | C | -1.4168 | |
16 | G | C | -0.9900 | |
17 | S | C | -1.2472 | |
18 | L | C | -0.8332 | |
19 | R | C | -2.1353 | |
20 | L | C | 0.0000 | |
21 | S | C | -0.5265 | |
22 | C | C | 0.0000 | |
23 | A | C | -0.2022 | |
24 | A | C | 0.0000 | |
25 | S | C | -0.2017 | |
26 | D | C | 0.0000 | |
27 | F | C | 1.5458 | |
28 | T | C | 0.2524 | |
29 | F | C | 0.0000 | |
30 | R | C | -2.0330 | |
31 | S | C | -0.8870 | |
32 | Y | C | -1.2169 | |
33 | E | C | -1.1329 | |
34 | M | C | 0.0000 | |
35 | S | C | 0.0000 | |
36 | W | C | 0.0000 | |
37 | V | C | 0.0000 | |
38 | R | C | 0.0000 | |
39 | Q | C | -0.2262 | |
40 | A | C | -0.9536 | |
41 | P | C | -1.2906 | |
42 | G | C | -1.4168 | |
43 | K | C | -2.0996 | |
44 | G | C | -0.9926 | |
45 | L | C | 0.5834 | |
46 | E | C | -0.1018 | |
47 | L | C | 0.8046 | mutated: WL47C |
48 | V | C | 0.0000 | |
49 | S | C | 0.0000 | |
50 | A | C | 0.0000 | |
51 | I | C | 0.0000 | |
52 | S | C | -0.5409 | |
53 | G | C | -1.2461 | |
54 | S | C | -1.2292 | |
55 | G | C | -1.0821 | |
56 | G | C | -0.7346 | |
57 | S | C | -0.2425 | |
58 | T | C | 0.3411 | |
59 | Y | C | 0.9109 | |
60 | Y | C | -0.1120 | |
61 | A | C | -0.9572 | |
62 | D | C | -2.3031 | |
63 | S | C | -1.7079 | |
64 | V | C | 0.0000 | |
65 | K | C | -2.3335 | |
66 | G | C | -1.6115 | |
67 | R | C | 0.0000 | |
68 | F | C | 0.0000 | |
69 | T | C | -0.6344 | |
70 | I | C | 0.0000 | |
71 | S | C | -0.5622 | |
72 | R | C | -1.3627 | |
73 | D | C | -1.9805 | |
74 | N | C | -2.1902 | |
75 | S | C | -1.7905 | |
76 | K | C | -2.3163 | |
77 | N | C | -1.6491 | |
78 | T | C | 0.0000 | |
79 | L | C | 0.0000 | |
80 | Y | C | -0.6694 | |
81 | L | C | 0.0000 | |
82 | Q | C | -1.2402 | |
83 | M | C | 0.0000 | |
84 | N | C | -1.3382 | |
85 | S | C | -1.2351 | |
86 | L | C | 0.0000 | |
87 | R | C | -2.4750 | |
88 | A | C | -1.8925 | |
89 | E | C | -2.3448 | |
90 | D | C | 0.0000 | |
91 | T | C | -0.3299 | |
92 | A | C | 0.0000 | |
93 | I | C | 1.0887 | |
94 | Y | C | 0.0000 | |
95 | N | C | 0.3366 | mutated: YN95C |
96 | C | C | 0.0000 | |
97 | A | C | 0.0000 | |
98 | R | C | 0.0000 | |
99 | L | C | 0.0000 | |
100 | R | C | -3.1752 | |
101 | D | C | -3.3174 | |
102 | G | C | -2.0546 | |
103 | F | C | -1.1354 | |
104 | N | C | -2.3972 | |
105 | K | C | -3.1647 | |
106 | G | C | -1.8853 | |
107 | F | C | -0.9857 | |
108 | D | C | -1.1261 | |
109 | Y | C | -0.2783 | |
110 | W | C | 0.3337 | |
111 | G | C | -0.2495 | |
112 | Q | C | -0.9979 | |
113 | G | C | -0.0558 | |
114 | T | C | 0.6684 | |
115 | L | C | 1.9955 | |
116 | V | C | 0.0000 | |
117 | T | C | 0.5951 | |
118 | V | C | 0.0000 | |
119 | S | C | -0.7804 | |
120 | S | C | -1.0628 |