Project name: F2F2

Status: done

Started: 2025-06-25 14:01:08
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Chain sequence(s) H: EVQLLESGGGLVQPGGSLRLSCAASGFTFSSSQMSWFRQAPGKEREFISAVTLVSRTHYADSVKGRFTISRDNAKNTLYLQMNSLKAEDTAMYYCVARAAWGTDYREQGYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:28)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:28)
Show buried residues

Minimal score value
-3.7789
Maximal score value
1.7616
Average score
-0.7896
Total score value
-95.5356

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -2.1162
2 V H -1.2185
3 Q H -1.2492
4 L H 0.0000
5 L H 0.8566
6 E H -0.1926
7 S H -0.5868
8 G H -0.9877
9 G H -0.7948
11 G H 0.1401
12 L H 1.0071
13 V H 0.0008
14 Q H -1.3340
15 P H -1.5740
16 G H -1.3720
17 G H 0.0000
18 S H -1.1668
19 L H -0.9779
20 R H -2.1201
21 L H 0.0000
22 S H -0.4430
23 C H 0.0000
24 A H -0.1216
25 A H 0.0000
26 S H -0.7981
27 G H -1.1541
28 F H -0.4647
29 T H -0.1545
30 F H 0.0000
35 S H 0.0611
36 S H 0.4970
37 S H 0.0527
38 Q H 0.0897
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 F H -0.6209
43 R H -1.4814
44 Q H -2.2295
45 A H -2.1187
46 P H -1.4578
47 G H -1.8638
48 K H -3.4381
49 E H -3.7789
50 R H -3.0991
51 E H -2.7714
52 F H -0.7134
53 I H 0.0000
54 S H 0.0000
55 A H 0.0000
56 V H 0.0000
57 T H 0.3279
58 L H 1.6012
59 V H 1.7616
63 S H 0.0995
64 R H -1.4153
65 T H -1.2836
66 H H -1.7173
67 Y H -1.3839
68 A H -1.8046
69 D H -2.6919
70 S H -2.0407
71 V H 0.0000
72 K H -2.8261
74 G H -1.7214
75 R H -1.6791
76 F H 0.0000
77 T H -1.0093
78 I H 0.0000
79 S H -0.7503
80 R H -0.9156
81 D H -1.7405
82 N H -2.0169
83 A H -1.6596
84 K H -2.4054
85 N H -1.8397
86 T H -1.0741
87 L H 0.0000
88 Y H -0.6269
89 L H 0.0000
90 Q H -1.3300
91 M H 0.0000
92 N H -1.4742
93 S H -1.2790
94 L H 0.0000
95 K H -2.1784
96 A H -1.6369
97 E H -2.2216
98 D H 0.0000
99 T H -0.9231
100 A H 0.0000
101 M H -0.6914
102 Y H 0.0000
103 Y H -0.0892
104 C H 0.0000
105 V H 0.0000
106 A H 0.0000
107 R H -0.6766
108 A H -0.6479
109 A H -0.7126
110 W H -0.4753
111 G H -0.7135
111A T H -1.0586
112A D H -1.5990
112 Y H -0.4361
113 R H 0.0000
114 E H -1.9491
115 Q H -1.5992
116 G H -0.7442
117 Y H 0.1310
118 W H 0.4560
119 G H -0.1224
120 Q H -0.9467
121 G H -0.6579
122 T H -0.8781
123 Q H -1.1359
124 V H 0.0000
125 T H -0.2958
126 V H 0.0000
127 S H -0.6612
128 S H -0.4822
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Laboratory of Theory of Biopolymers 2018