| Chain sequence(s) |
A: VSDVPRDLEVVAATPTSLLISWYYPFSAFYYRITYGETGGNSPVQEFTVPRPSDTATISGLKPGVDYTITVYAVTSLGSYSRPISINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:33)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.3475 | |
| 2 | S | A | -0.3771 | |
| 3 | D | A | -1.5306 | |
| 4 | V | A | -0.7948 | |
| 5 | P | A | 0.0000 | |
| 6 | R | A | -1.5827 | |
| 7 | D | A | -2.2434 | |
| 8 | L | A | 0.0000 | |
| 9 | E | A | -1.6882 | |
| 10 | V | A | 0.1006 | |
| 11 | V | A | 1.5371 | |
| 12 | A | A | 0.8969 | |
| 13 | A | A | 0.3291 | |
| 14 | T | A | -0.3327 | |
| 15 | P | A | -1.0526 | |
| 16 | T | A | -0.9518 | |
| 17 | S | A | -0.5143 | |
| 18 | L | A | 0.0000 | |
| 19 | L | A | 0.7692 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.5283 | |
| 22 | W | A | 0.0000 | |
| 23 | Y | A | 0.0671 | |
| 24 | Y | A | -0.0137 | |
| 25 | P | A | 0.3170 | |
| 26 | F | A | 0.7995 | |
| 27 | S | A | 0.1404 | |
| 28 | A | A | 0.0000 | |
| 29 | F | A | 1.5672 | |
| 30 | Y | A | 0.2173 | |
| 31 | Y | A | 0.0000 | |
| 32 | R | A | -0.4960 | |
| 33 | I | A | 0.0000 | |
| 34 | T | A | -0.6404 | |
| 35 | Y | A | -0.4357 | |
| 36 | G | A | -0.8690 | |
| 37 | E | A | -1.8749 | |
| 38 | T | A | -1.5152 | |
| 39 | G | A | -1.3604 | |
| 40 | G | A | -1.5414 | |
| 41 | N | A | -1.5783 | |
| 42 | S | A | -0.9557 | |
| 43 | P | A | -0.4285 | |
| 44 | V | A | 0.2499 | |
| 45 | Q | A | -1.2153 | |
| 46 | E | A | -1.8303 | |
| 47 | F | A | -0.7423 | |
| 48 | T | A | -0.5469 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -0.8925 | |
| 51 | R | A | -1.7727 | |
| 52 | P | A | -1.3656 | |
| 53 | S | A | -1.2384 | |
| 54 | D | A | -1.0453 | |
| 55 | T | A | -0.4815 | |
| 56 | A | A | 0.0000 | |
| 57 | T | A | 0.2452 | |
| 58 | I | A | 0.0000 | |
| 59 | S | A | -0.6561 | |
| 60 | G | A | -1.0251 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.3964 | |
| 63 | P | A | -1.6162 | |
| 64 | G | A | -1.3278 | |
| 65 | V | A | -1.6156 | |
| 66 | D | A | -2.7018 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | -0.9432 | |
| 69 | I | A | 0.0000 | |
| 70 | T | A | -0.3143 | |
| 71 | V | A | 0.0000 | |
| 72 | Y | A | -0.1742 | |
| 73 | A | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | T | A | 1.2910 | |
| 76 | S | A | 1.1833 | |
| 77 | L | A | 1.5816 | |
| 78 | G | A | 0.7043 | |
| 79 | S | A | 0.5621 | |
| 80 | Y | A | 0.4087 | |
| 81 | S | A | 0.0000 | |
| 82 | R | A | -1.8768 | |
| 83 | P | A | -0.8968 | |
| 84 | I | A | -0.4200 | |
| 85 | S | A | -0.3898 | |
| 86 | I | A | -0.5142 | |
| 87 | N | A | -1.8805 | |
| 88 | Y | A | -1.6427 | |
| 89 | R | A | -2.7396 | |
| 90 | T | A | -1.6884 |