| Chain sequence(s) |
A: TSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAAKLMKLQNQRGGRIFLQDIQKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:22)
[INFO] Main: Simulation completed successfully. (00:03:23)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 5 | T | A | -0.4954 | |
| 6 | S | A | -0.9722 | |
| 7 | Q | A | -0.9563 | |
| 8 | V | A | -0.2536 | |
| 9 | R | A | -1.4706 | |
| 10 | Q | A | -1.9767 | |
| 11 | N | A | -2.6188 | |
| 12 | Y | A | 0.0000 | |
| 13 | H | A | -2.4958 | |
| 14 | Q | A | -2.5526 | |
| 15 | D | A | -2.6010 | |
| 16 | S | A | 0.0000 | |
| 17 | E | A | -1.5681 | |
| 18 | A | A | -1.2655 | |
| 19 | A | A | -1.3297 | |
| 20 | I | A | 0.0000 | |
| 21 | N | A | -0.2248 | |
| 22 | R | A | -1.0360 | |
| 23 | Q | A | 0.0000 | |
| 24 | I | A | 0.0000 | |
| 25 | N | A | -0.5025 | |
| 26 | L | A | -0.2923 | |
| 27 | E | A | 0.0000 | |
| 28 | L | A | -0.3697 | |
| 29 | Y | A | -0.1388 | |
| 30 | A | A | 0.0000 | |
| 31 | S | A | 0.0000 | |
| 32 | Y | A | 0.3229 | |
| 33 | V | A | 0.0000 | |
| 34 | Y | A | 0.0000 | |
| 35 | L | A | 0.8303 | |
| 36 | S | A | 0.0318 | |
| 37 | M | A | 0.0000 | |
| 38 | S | A | 0.0000 | |
| 39 | Y | A | 0.3032 | |
| 40 | Y | A | 0.0000 | |
| 41 | F | A | 0.0000 | |
| 42 | D | A | -2.8577 | |
| 43 | R | A | -2.9395 | |
| 44 | D | A | -3.3729 | |
| 45 | D | A | -3.0031 | |
| 46 | V | A | -1.9802 | |
| 47 | A | A | -1.8390 | |
| 48 | L | A | -1.6745 | |
| 49 | K | A | -2.3821 | |
| 50 | N | A | -1.7743 | |
| 51 | F | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | K | A | -1.7365 | |
| 54 | Y | A | -0.9152 | |
| 55 | F | A | 0.0000 | |
| 56 | L | A | -0.4725 | |
| 57 | H | A | -1.6510 | |
| 58 | Q | A | -1.5657 | |
| 59 | S | A | 0.0000 | |
| 60 | H | A | -2.4039 | |
| 61 | E | A | -2.7068 | |
| 62 | E | A | 0.0000 | |
| 63 | R | A | -2.4993 | |
| 64 | E | A | -3.0721 | |
| 65 | H | A | 0.0000 | |
| 66 | A | A | 0.0000 | |
| 67 | A | A | -1.6697 | |
| 68 | K | A | -1.9290 | |
| 69 | L | A | 0.0000 | |
| 70 | M | A | -1.4191 | |
| 71 | K | A | -2.5292 | |
| 72 | L | A | 0.0000 | |
| 73 | Q | A | 0.0000 | |
| 74 | N | A | -2.6451 | |
| 75 | Q | A | -2.3536 | |
| 76 | R | A | -2.1139 | |
| 77 | G | A | 0.0000 | |
| 78 | G | A | 0.0000 | |
| 79 | R | A | -1.3956 | |
| 80 | I | A | 0.5047 | |
| 81 | F | A | 2.0456 | |
| 82 | L | A | 1.2969 | |
| 83 | Q | A | -1.1506 | |
| 84 | D | A | -2.3031 | |
| 85 | I | A | -1.2190 | |
| 86 | Q | A | -2.4787 | |
| 87 | K | A | -2.8219 | |
| 88 | P | A | -1.9938 | |
| 89 | D | A | -2.8126 | |
| 90 | C | A | -2.4091 | |
| 91 | D | A | -3.3143 | |
| 92 | D | A | -3.3015 | |
| 93 | W | A | 0.0000 | |
| 94 | E | A | -2.6190 | |
| 95 | S | A | -1.6418 | |
| 96 | G | A | 0.0000 | |
| 97 | L | A | -1.2961 | |
| 98 | N | A | -1.2624 | |
| 99 | A | A | 0.0000 | |
| 100 | M | A | 0.0000 | |
| 101 | E | A | -1.3082 | |
| 102 | C | A | -0.7453 | |
| 103 | A | A | 0.0000 | |
| 104 | L | A | -1.4924 | |
| 105 | H | A | -1.8670 | |
| 106 | L | A | 0.0000 | |
| 107 | E | A | 0.0000 | |
| 108 | K | A | -2.3493 | |
| 109 | N | A | -2.4395 | |
| 110 | V | A | 0.0000 | |
| 111 | N | A | -1.4257 | |
| 112 | Q | A | -2.0583 | |
| 113 | S | A | 0.0000 | |
| 114 | L | A | 0.0000 | |
| 115 | L | A | -1.1822 | |
| 116 | E | A | -2.1397 | |
| 117 | L | A | 0.0000 | |
| 118 | H | A | -2.0242 | |
| 119 | K | A | -2.7546 | |
| 120 | L | A | -2.2860 | |
| 121 | A | A | 0.0000 | |
| 122 | T | A | -2.4629 | |
| 123 | D | A | -2.9486 | |
| 124 | K | A | -3.0791 | |
| 125 | N | A | -2.7597 | |
| 126 | D | A | 0.0000 | |
| 127 | P | A | -1.6247 | |
| 128 | H | A | -1.7819 | |
| 129 | L | A | 0.0000 | |
| 130 | C | A | -1.8322 | |
| 131 | D | A | -2.4603 | |
| 132 | F | A | -1.3614 | |
| 133 | I | A | 0.0000 | |
| 134 | E | A | -2.1008 | |
| 135 | T | A | -1.4852 | |
| 136 | H | A | -1.3117 | |
| 137 | Y | A | 0.0000 | |
| 138 | L | A | -0.7511 | |
| 139 | N | A | -1.1158 | |
| 140 | E | A | -1.1459 | |
| 141 | Q | A | 0.0000 | |
| 142 | V | A | -0.1270 | |
| 143 | K | A | -1.9536 | |
| 144 | A | A | -1.4297 | |
| 145 | I | A | -1.4257 | |
| 146 | K | A | -2.4485 | |
| 147 | E | A | -2.3558 | |
| 148 | L | A | 0.0000 | |
| 149 | G | A | -1.8354 | |
| 150 | D | A | -1.9776 | |
| 151 | H | A | -1.7574 | |
| 152 | V | A | 0.0000 | |
| 153 | T | A | -1.7114 | |
| 154 | N | A | -1.7090 | |
| 155 | L | A | 0.0000 | |
| 156 | R | A | -2.9860 | |
| 157 | K | A | -2.6065 | |
| 158 | M | A | -1.2229 | |
| 159 | G | A | -1.6403 | |
| 160 | A | A | -1.6003 | |
| 161 | P | A | -1.7049 | |
| 162 | E | A | -2.0990 | |
| 163 | S | A | -0.8363 | |
| 164 | G | A | -0.0079 | |
| 165 | L | A | 1.5223 | |
| 166 | A | A | 0.0000 | |
| 167 | E | A | 0.2610 | |
| 168 | Y | A | 1.0756 | |
| 169 | L | A | 0.6286 | |
| 170 | F | A | 0.0000 | |
| 171 | D | A | 0.0000 | |
| 172 | K | A | -1.7210 | |
| 173 | H | A | -1.4516 | |
| 174 | T | A | -0.9134 | |
| 175 | L | A | -0.9982 | |
| 176 | G | A | -1.5169 |