| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPQHEGADDRVNFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPEGHPLPSSPPPSPLYTPPPPSSPYAVPPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9457 | |
| 2 | L | A | 1.9660 | |
| 3 | P | A | 0.8370 | |
| 4 | P | A | 0.3758 | |
| 5 | T | A | 0.1241 | |
| 6 | T | A | 0.1350 | |
| 7 | P | A | 0.1865 | |
| 8 | V | A | 1.2131 | |
| 9 | A | A | 0.0840 | |
| 10 | K | A | -1.0365 | |
| 11 | V | A | -0.1837 | |
| 12 | Q | A | -1.4234 | |
| 13 | S | A | -1.5603 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4183 | |
| 16 | E | A | -2.4388 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4580 | |
| 20 | P | A | 0.1271 | |
| 21 | T | A | 0.1576 | |
| 22 | S | A | -0.0970 | |
| 23 | L | A | 0.0921 | |
| 24 | F | A | -0.0355 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2850 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9010 | |
| 31 | R | A | -2.6870 | |
| 32 | L | A | -0.8046 | |
| 33 | L | A | 1.1586 | |
| 34 | T | A | 1.3674 | |
| 35 | V | A | 1.8170 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2618 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.2186 | |
| 40 | A | A | 0.0796 | |
| 41 | D | A | -0.1228 | |
| 42 | I | A | 1.4988 | |
| 43 | V | A | 1.2101 | |
| 44 | K | A | -1.3624 | |
| 45 | D | A | -2.4423 | |
| 46 | G | A | -1.4469 | |
| 47 | K | A | -1.1225 | |
| 48 | V | A | 1.5366 | |
| 49 | V | A | 1.9846 | |
| 50 | V | A | 1.5162 | |
| 51 | P | A | 0.7669 | |
| 52 | K | A | -0.0415 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1450 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4027 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2688 | |
| 70 | K | A | -1.7896 | |
| 71 | F | A | -0.6391 | |
| 72 | A | A | -0.5826 | |
| 73 | L | A | -0.8720 | |
| 74 | P | A | -1.2146 | |
| 75 | Q | A | -2.5076 | |
| 76 | K | A | -3.1104 | |
| 77 | D | A | -2.9914 | |
| 78 | F | A | -1.6751 | |
| 79 | Y | A | -1.8851 | |
| 80 | D | A | -2.6822 | |
| 81 | P | A | -2.2997 | |
| 82 | E | A | -3.0470 | |
| 83 | K | A | -3.3946 | |
| 84 | E | A | -2.4638 | |
| 85 | R | A | -1.2920 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6745 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9605 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3628 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7023 | |
| 99 | G | A | -0.5400 | |
| 100 | P | A | -0.4101 | |
| 101 | L | A | 0.0321 | |
| 102 | G | A | -0.2073 | |
| 103 | K | A | -0.5899 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4243 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1042 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1516 | |
| 110 | L | A | -0.0958 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2638 | |
| 113 | K | A | -0.4360 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -1.4749 | |
| 116 | D | A | -1.3981 | |
| 117 | T | A | -1.0504 | |
| 118 | E | A | -1.7154 | |
| 119 | N | A | -2.1621 | |
| 120 | P | A | -1.9822 | |
| 121 | T | A | -1.6867 | |
| 122 | E | A | -2.4882 | |
| 123 | P | A | -1.4764 | |
| 124 | Q | A | -1.9928 | |
| 125 | H | A | -2.4525 | |
| 126 | E | A | -2.8561 | |
| 127 | G | A | -2.3050 | |
| 128 | A | A | -1.5753 | |
| 129 | D | A | -2.4589 | |
| 130 | D | A | -2.1261 | |
| 131 | R | A | -1.3988 | |
| 132 | V | A | -0.4389 | |
| 133 | N | A | -0.8752 | |
| 134 | F | A | -0.3728 | |
| 135 | S | A | -0.3586 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4534 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5611 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2185 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1153 | |
| 157 | D | A | 0.2788 | |
| 158 | I | A | 0.8171 | |
| 159 | A | A | 0.1068 | |
| 160 | E | A | -1.4842 | |
| 161 | P | A | -0.2326 | |
| 162 | C | A | 0.1849 | |
| 163 | P | A | -0.1786 | |
| 164 | G | A | -0.0902 | |
| 165 | L | A | 0.5676 | |
| 166 | P | A | -0.1261 | |
| 167 | P | A | -0.3450 | |
| 168 | G | A | -0.4253 | |
| 169 | A | A | -0.0299 | |
| 170 | C | A | 0.7380 | |
| 171 | P | A | 0.5508 | |
| 172 | P | A | 0.7826 | |
| 173 | I | A | 2.0432 | |
| 174 | Q | A | 0.8521 | |
| 175 | L | A | 1.4417 | |
| 176 | V | A | 0.8249 | |
| 177 | N | A | -0.3119 | |
| 178 | S | A | 0.0146 | |
| 179 | V | A | 0.4226 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3735 | |
| 182 | D | A | 0.0806 | |
| 183 | G | A | -0.1602 | |
| 184 | D | A | -0.5422 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1283 | |
| 190 | F | A | 0.0620 | |
| 191 | G | A | -0.1062 | |
| 192 | N | A | -0.2724 | |
| 193 | M | A | -0.1375 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3846 | |
| 197 | E | A | -2.5996 | |
| 198 | L | A | -1.1968 | |
| 199 | Q | A | -2.5295 | |
| 200 | Q | A | -3.3159 | |
| 201 | D | A | -3.5780 | |
| 202 | R | A | -3.3322 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4849 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3576 | |
| 211 | S | A | -1.7025 | |
| 212 | T | A | -1.4421 | |
| 213 | R | A | -2.0986 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1643 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3497 | |
| 220 | L | A | 0.6151 | |
| 221 | K | A | -1.0891 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8031 | |
| 224 | N | A | -1.4838 | |
| 225 | E | A | -1.2251 | |
| 226 | A | A | -0.6067 | |
| 227 | Y | A | -0.3646 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6494 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0826 | |
| 234 | F | A | 0.2650 | |
| 235 | G | A | -0.8148 | |
| 236 | R | A | -2.6081 | |
| 237 | R | A | -2.8735 | |
| 238 | E | A | -2.1273 | |
| 239 | Q | A | -0.1252 | |
| 240 | V | A | 1.4427 | |
| 241 | Y | A | 1.1219 | |
| 242 | A | A | 0.2009 | |
| 243 | R | A | -0.9698 | |
| 244 | H | A | -0.9204 | |
| 245 | F | A | 0.0909 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.5745 | |
| 249 | C | A | -1.2807 | |
| 250 | G | A | -1.0886 | |
| 251 | P | A | -1.0912 | |
| 252 | E | A | -1.3383 | |
| 253 | G | A | -1.2743 | |
| 254 | H | A | -1.4360 | |
| 255 | P | A | -0.9900 | |
| 256 | L | A | 0.2177 | |
| 257 | P | A | -0.0761 | |
| 258 | S | A | -0.1942 | |
| 259 | S | A | -0.2369 | |
| 260 | P | A | -0.6290 | |
| 261 | P | A | -0.4692 | |
| 262 | P | A | -0.3547 | |
| 263 | S | A | 0.0992 | |
| 264 | P | A | 0.3729 | |
| 265 | L | A | 1.5177 | |
| 266 | Y | A | 0.8756 | |
| 267 | T | A | 0.0820 | |
| 268 | P | A | 0.1567 | |
| 269 | P | A | 0.1273 | |
| 270 | P | A | -0.2277 | |
| 271 | P | A | -0.1478 | |
| 272 | S | A | -0.3462 | |
| 273 | S | A | 0.1494 | |
| 274 | P | A | 0.1842 | |
| 275 | Y | A | 1.1981 | |
| 276 | A | A | 0.9836 | |
| 277 | V | A | 1.9080 | |
| 278 | P | A | 1.0640 | |
| 279 | P | A | -0.1373 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.3661 | |
| 282 | D | A | -0.8764 | |
| 283 | Y | A | 0.8748 | |
| 284 | F | A | 0.6790 | |
| 285 | G | A | 0.2332 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9277 | |
| 291 | L | A | 1.6258 | |
| 292 | V | A | 0.6007 | |
| 293 | S | A | -0.1636 | |
| 294 | S | A | -0.9640 | |
| 295 | D | A | -1.8429 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0973 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6290 | |
| 301 | R | A | -1.8114 | |
| 302 | P | A | -0.9544 | |
| 303 | F | A | -0.1818 | |
| 304 | W | A | -0.5643 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0875 | |
| 307 | R | A | -2.8326 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2460 | |
| 310 | G | A | -1.2212 | |
| 311 | N | A | -1.2743 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8170 | |
| 319 | N | A | -0.8530 | |
| 320 | E | A | -1.0395 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3381 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0661 | |
| 333 | N | A | 0.5482 | |
| 334 | F | A | 1.7509 | |
| 335 | T | A | 0.8636 | |
| 336 | I | A | 0.4383 | |
| 337 | S | A | -0.8220 | |
| 338 | Q | A | -1.4631 | |
| 339 | Q | A | -1.1038 | |
| 340 | L | A | 0.5707 | |
| 341 | C | A | -0.0778 | |
| 342 | T | A | -0.4746 | |
| 343 | P | A | -1.1955 | |
| 344 | E | A | -1.7384 | |
| 345 | P | A | -0.7393 | |
| 346 | N | A | -0.7567 | |
| 347 | V | A | 1.2953 | |
| 348 | Y | A | 1.2344 | |
| 349 | D | A | 0.0540 | |
| 350 | P | A | -0.3311 | |
| 351 | S | A | -0.2640 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5477 | |
| 354 | K | A | -1.6664 | |
| 355 | N | A | -1.7002 | |
| 356 | Y | A | -0.1065 | |
| 357 | L | A | 0.6310 | |
| 358 | R | A | 0.9555 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3806 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0790 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0642 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6933 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3058 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3095 | |
| 376 | L | A | -1.7072 | |
| 377 | D | A | -1.9817 | |
| 378 | P | A | -1.0352 | |
| 379 | G | A | -1.0115 | |
| 380 | V | A | -0.9304 | |
| 381 | L | A | -0.5262 | |
| 382 | A | A | -0.6505 | |
| 383 | H | A | -0.8062 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3978 | |
| 386 | T | A | -0.5476 | |
| 387 | M | A | -0.2977 | |
| 388 | N | A | -0.8597 | |
| 389 | P | A | -1.2398 | |
| 390 | T | A | -1.4371 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4344 | |
| 393 | E | A | -2.7720 | |
| 394 | N | A | -2.3753 | |
| 395 | W | A | -1.3733 | |
| 396 | N | A | -1.1023 | |
| 397 | L | A | -0.1897 | |
| 398 | G | A | 0.5367 | |
| 399 | F | A | 2.4151 | |
| 400 | V | A | 1.8136 | |
| 401 | P | A | 0.0483 | |
| 402 | P | A | -1.8490 | |
| 403 | K | A | -3.3209 | |
| 404 | E | A | -3.7596 | |
| 405 | R | A | -3.8785 | |
| 406 | E | A | -3.7662 | |
| 407 | D | A | -2.8489 | |
| 408 | P | A | -1.7552 | |
| 409 | Y | A | -0.9773 | |
| 410 | K | A | -2.1156 | |
| 411 | G | A | -0.6259 | |
| 412 | L | A | 0.6839 | |
| 413 | I | A | 1.5945 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3751 | |
| 416 | E | A | -1.6570 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9415 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0494 | |
| 421 | E | A | -2.7754 | |
| 422 | R | A | -2.6179 | |
| 423 | F | A | -1.2704 | |
| 424 | S | A | -1.4573 | |
| 425 | Q | A | -1.8397 | |
| 426 | D | A | -2.8935 | |
| 427 | L | A | -1.9958 | |
| 428 | D | A | -2.7880 | |
| 429 | Q | A | -2.6181 | |
| 430 | F | A | -1.4302 | |
| 431 | A | A | -0.9167 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6454 | |
| 435 | K | A | -0.7472 | |
| 436 | F | A | 0.1139 | |
| 437 | L | A | 1.0031 | |
| 438 | Y | A | 0.8068 | |
| 439 | Q | A | -0.2893 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine