| Chain sequence(s) |
A: KPHIDNYLHDKDKDEKIEQYDKNVKEQASKDKKQQAKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGHTFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRDVKPTDVGVLDEQKGKDKQLTLITCDDYNEKTGVWEKRKIFVATEVK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:59)
[INFO] Main: Simulation completed successfully. (00:07:00)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.8906 | |
| 2 | P | A | -1.6722 | |
| 3 | H | A | -0.9640 | |
| 4 | I | A | 0.6807 | |
| 5 | D | A | -0.8411 | |
| 6 | N | A | -0.8273 | |
| 7 | Y | A | 0.6850 | |
| 8 | L | A | 0.2120 | |
| 9 | H | A | -1.2155 | |
| 10 | D | A | -1.8290 | |
| 11 | K | A | -3.1377 | |
| 12 | D | A | -3.4393 | |
| 13 | K | A | 0.0000 | |
| 14 | D | A | -4.4521 | |
| 15 | E | A | -4.8692 | |
| 16 | K | A | -3.8221 | |
| 17 | I | A | 0.0000 | |
| 18 | E | A | -4.2993 | |
| 19 | Q | A | -4.0827 | |
| 20 | Y | A | 0.0000 | |
| 21 | D | A | -3.6781 | |
| 22 | K | A | -4.5058 | |
| 23 | N | A | -4.1377 | |
| 24 | V | A | -3.5118 | |
| 25 | K | A | -4.5139 | |
| 26 | E | A | -4.7234 | |
| 27 | Q | A | -4.4745 | |
| 28 | A | A | -4.2650 | |
| 29 | S | A | -3.5851 | |
| 30 | K | A | -4.3436 | |
| 31 | D | A | -4.6758 | |
| 32 | K | A | -4.3249 | |
| 33 | K | A | -4.0180 | |
| 34 | Q | A | -3.7927 | |
| 35 | Q | A | -3.2802 | |
| 36 | A | A | -2.4846 | |
| 37 | K | A | -2.9302 | |
| 38 | P | A | -2.0672 | |
| 39 | Q | A | -1.8884 | |
| 40 | I | A | -1.1286 | |
| 41 | P | A | -1.6949 | |
| 42 | K | A | -2.7051 | |
| 43 | D | A | -2.1691 | |
| 44 | K | A | -2.3625 | |
| 45 | S | A | -1.9309 | |
| 46 | K | A | -2.2471 | |
| 47 | V | A | -0.9570 | |
| 48 | A | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | Y | A | -0.1424 | |
| 51 | I | A | 0.0000 | |
| 52 | E | A | -1.2352 | |
| 53 | I | A | 0.0000 | |
| 54 | P | A | -1.8444 | |
| 55 | D | A | -2.9867 | |
| 56 | A | A | 0.0000 | |
| 57 | D | A | -2.7819 | |
| 58 | I | A | 0.0000 | |
| 59 | K | A | -1.5386 | |
| 60 | E | A | 0.0000 | |
| 61 | P | A | 0.0000 | |
| 62 | V | A | 0.0000 | |
| 63 | Y | A | 0.0000 | |
| 64 | P | A | 0.0000 | |
| 65 | G | A | 0.0000 | |
| 66 | P | A | -2.0831 | |
| 67 | A | A | -1.1717 | |
| 68 | T | A | -1.3402 | |
| 69 | P | A | -1.6554 | |
| 70 | E | A | -2.6544 | |
| 71 | Q | A | 0.0000 | |
| 72 | L | A | 0.0000 | |
| 73 | N | A | -2.5093 | |
| 74 | R | A | -2.4589 | |
| 75 | G | A | 0.0000 | |
| 76 | V | A | 0.0000 | |
| 77 | S | A | 0.0000 | |
| 78 | F | A | 0.0000 | |
| 79 | A | A | -1.3445 | |
| 80 | E | A | -2.9528 | |
| 81 | E | A | -3.5555 | |
| 82 | N | A | -2.7293 | |
| 83 | E | A | -2.1779 | |
| 84 | S | A | -1.7515 | |
| 85 | L | A | 0.0000 | |
| 86 | D | A | -2.3299 | |
| 87 | D | A | -1.6608 | |
| 88 | Q | A | -2.6203 | |
| 89 | N | A | 0.0000 | |
| 90 | I | A | 0.0000 | |
| 91 | S | A | 0.0000 | |
| 92 | I | A | 0.0000 | |
| 93 | A | A | 0.0000 | |
| 94 | G | A | 0.0000 | |
| 95 | H | A | -0.0751 | |
| 96 | T | A | 0.0423 | |
| 97 | F | A | 1.4428 | |
| 98 | I | A | 1.5546 | |
| 99 | D | A | -0.7790 | |
| 100 | R | A | -0.7123 | |
| 101 | P | A | -0.4661 | |
| 102 | N | A | -0.8140 | |
| 103 | Y | A | -0.2792 | |
| 104 | Q | A | 0.0000 | |
| 105 | F | A | 0.0000 | |
| 106 | T | A | 0.0000 | |
| 107 | N | A | -1.2141 | |
| 108 | L | A | 0.0000 | |
| 109 | K | A | -2.2869 | |
| 110 | A | A | -2.0509 | |
| 111 | A | A | 0.0000 | |
| 112 | K | A | -3.2339 | |
| 113 | K | A | -2.7602 | |
| 114 | G | A | -2.2201 | |
| 115 | S | A | 0.0000 | |
| 116 | M | A | -1.2567 | |
| 117 | V | A | 0.0000 | |
| 118 | Y | A | -0.5548 | |
| 119 | F | A | 0.0000 | |
| 120 | K | A | -0.8677 | |
| 121 | V | A | 0.0000 | |
| 122 | G | A | -2.0612 | |
| 123 | N | A | -2.5217 | |
| 124 | E | A | -1.8438 | |
| 125 | T | A | -1.0829 | |
| 126 | R | A | -1.1250 | |
| 127 | K | A | -1.6353 | |
| 128 | Y | A | 0.0000 | |
| 129 | K | A | -1.6174 | |
| 130 | M | A | 0.0000 | |
| 131 | T | A | -1.0665 | |
| 132 | S | A | -0.9358 | |
| 133 | I | A | -1.4195 | |
| 134 | R | A | -2.5477 | |
| 135 | D | A | -3.5630 | |
| 136 | V | A | 0.0000 | |
| 137 | K | A | -2.8686 | |
| 138 | P | A | -1.5193 | |
| 139 | T | A | -0.7145 | |
| 140 | D | A | -1.0066 | |
| 141 | V | A | 0.6262 | |
| 142 | G | A | -0.4792 | |
| 143 | V | A | -0.1007 | |
| 144 | L | A | -0.6623 | |
| 145 | D | A | -2.0788 | |
| 146 | E | A | -2.6860 | |
| 147 | Q | A | -3.3398 | |
| 148 | K | A | -3.4465 | |
| 149 | G | A | -2.7513 | |
| 150 | K | A | -3.5458 | |
| 151 | D | A | -3.4495 | |
| 152 | K | A | -2.7452 | |
| 153 | Q | A | 0.0000 | |
| 154 | L | A | 0.0000 | |
| 155 | T | A | 0.0000 | |
| 156 | L | A | 0.0000 | |
| 157 | I | A | 0.0000 | |
| 158 | T | A | 0.0000 | |
| 159 | C | A | 0.0000 | |
| 160 | D | A | -1.8626 | |
| 161 | D | A | -2.7346 | |
| 162 | Y | A | -1.7584 | |
| 163 | N | A | -2.1683 | |
| 164 | E | A | -2.9204 | |
| 165 | K | A | -2.6866 | |
| 166 | T | A | -1.6207 | |
| 167 | G | A | -1.4517 | |
| 168 | V | A | -1.1176 | |
| 169 | W | A | -1.8129 | |
| 170 | E | A | -2.7875 | |
| 171 | K | A | -3.5053 | |
| 172 | R | A | -3.0750 | |
| 173 | K | A | -2.7555 | |
| 174 | I | A | 0.0000 | |
| 175 | F | A | 0.0000 | |
| 176 | V | A | -0.1787 | |
| 177 | A | A | 0.0000 | |
| 178 | T | A | -1.4171 | |
| 179 | E | A | -1.6196 | |
| 180 | V | A | -1.3041 | |
| 181 | K | A | -1.9868 |