| Chain sequence(s) |
B: AMAEKMAAMERGKEVLVEMAKLIGNEEKAKEAEKMMEEAKKVVLAAMKAE
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:04)
[INFO] Main: Simulation completed successfully. (00:02:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | B | -0.6201 | |
| 2 | M | B | -0.5284 | |
| 3 | A | B | -0.8805 | |
| 4 | E | B | -2.2475 | |
| 5 | K | B | -2.0794 | |
| 6 | M | B | -1.5413 | |
| 7 | A | B | -1.8874 | |
| 8 | A | B | -2.0860 | |
| 9 | M | B | -2.2709 | |
| 10 | E | B | -3.5229 | |
| 11 | R | B | -2.9305 | |
| 12 | G | B | -1.7109 | |
| 13 | K | B | -2.6379 | |
| 14 | E | B | -2.5074 | |
| 15 | V | B | -0.2448 | |
| 16 | L | B | -0.5876 | |
| 17 | V | B | -2.0289 | |
| 18 | E | B | -1.1495 | |
| 19 | M | B | 0.5992 | |
| 20 | A | B | 0.0000 | |
| 21 | K | B | -1.7272 | |
| 22 | L | B | 1.1234 | |
| 23 | I | B | 1.3414 | |
| 24 | G | B | -0.8105 | |
| 25 | N | B | -2.4628 | |
| 26 | E | B | -4.2321 | |
| 27 | E | B | -4.7856 | |
| 28 | K | B | -4.2266 | |
| 29 | A | B | 0.0000 | |
| 30 | K | B | -4.9003 | |
| 31 | E | B | -4.6731 | |
| 32 | A | B | 0.0000 | |
| 33 | E | B | -4.3973 | |
| 34 | K | B | -4.2781 | |
| 35 | M | B | -2.6287 | |
| 36 | M | B | -3.0640 | |
| 37 | E | B | -4.0811 | |
| 38 | E | B | -3.1072 | |
| 39 | A | B | -1.6292 | |
| 40 | K | B | -2.2548 | |
| 41 | K | B | -1.8036 | |
| 42 | V | B | 0.2530 | |
| 43 | V | B | -0.0434 | |
| 44 | L | B | -0.2727 | |
| 45 | A | B | -0.3172 | |
| 46 | A | B | -0.3652 | |
| 47 | M | B | -0.7954 | |
| 48 | K | B | -1.7593 | |
| 49 | A | B | -1.4375 | |
| 50 | E | B | -2.2473 |