| Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKASGYIFSNYWIQWVRQAPGQGLEWMGEILPGSGSTEYTENFKDRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARYFFGSSPNWYFDVWGQGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCGASENIYGALNWYQQKPGKAPKLLIYGATNLADGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQNVLNTPLTFGQGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08)
[INFO] Main: Simulation completed successfully. (00:01:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3430 | |
| 2 | V | H | -0.4778 | |
| 3 | Q | H | -0.8261 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.1811 | |
| 6 | Q | H | 0.0000 | |
| 7 | S | H | -0.5055 | |
| 8 | G | H | -0.4217 | |
| 9 | A | H | 0.3718 | |
| 11 | E | H | 0.1689 | |
| 12 | V | H | 1.0535 | |
| 13 | K | H | -0.9306 | |
| 14 | K | H | -2.1827 | |
| 15 | P | H | -2.2862 | |
| 16 | G | H | -1.6231 | |
| 17 | A | H | -1.2582 | |
| 18 | S | H | -1.3338 | |
| 19 | V | H | 0.0000 | |
| 20 | K | H | -1.9673 | |
| 21 | V | H | 0.0000 | |
| 22 | S | H | -0.6424 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -0.9325 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.3434 | |
| 27 | G | H | -0.4181 | |
| 28 | Y | H | 0.5517 | |
| 29 | I | H | 1.6753 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.1602 | |
| 36 | N | H | -0.4508 | |
| 37 | Y | H | 0.4669 | |
| 38 | W | H | 0.3046 | |
| 39 | I | H | 0.0000 | |
| 40 | Q | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5291 | |
| 45 | A | H | -0.9031 | |
| 46 | P | H | -0.9175 | |
| 47 | G | H | -1.2125 | |
| 48 | Q | H | -1.8537 | |
| 49 | G | H | -1.3548 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9896 | |
| 52 | W | H | 0.0000 | |
| 53 | M | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | E | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | L | H | -0.2216 | |
| 58 | P | H | 0.0000 | |
| 59 | G | H | -0.7325 | |
| 62 | S | H | -0.5984 | |
| 63 | G | H | -0.5165 | |
| 64 | S | H | -0.5330 | |
| 65 | T | H | -0.6069 | |
| 66 | E | H | -1.5832 | |
| 67 | Y | H | -1.8478 | |
| 68 | T | H | 0.0000 | |
| 69 | E | H | -3.6153 | |
| 70 | N | H | -2.9799 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.7511 | |
| 74 | D | H | -3.3175 | |
| 75 | R | H | -2.0593 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -1.1331 | |
| 78 | M | H | 0.0000 | |
| 79 | T | H | -0.5551 | |
| 80 | R | H | -0.8764 | |
| 81 | D | H | -0.9575 | |
| 82 | T | H | -0.6317 | |
| 83 | S | H | -0.4775 | |
| 84 | T | H | -0.6026 | |
| 85 | S | H | -0.4622 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.6930 | |
| 89 | M | H | 0.0000 | |
| 90 | E | H | -1.2979 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -1.2798 | |
| 93 | S | H | -1.3908 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -3.0555 | |
| 96 | S | H | -2.3348 | |
| 97 | E | H | -2.4638 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.6706 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.5681 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | Y | H | 0.0000 | |
| 108 | F | H | 1.0034 | |
| 109 | F | H | 0.7341 | |
| 110 | G | H | 0.0839 | |
| 111 | S | H | -0.2405 | |
| 111A | S | H | -0.3706 | |
| 112A | P | H | -0.0691 | |
| 112 | N | H | -0.0776 | |
| 113 | W | H | 0.4775 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.3330 | |
| 117 | V | H | -0.1821 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.3169 | |
| 121 | G | H | -0.5207 | |
| 122 | T | H | 0.0000 | |
| 123 | L | H | 1.1020 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0516 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.9647 | |
| 128 | S | H | -0.8591 | |
| 1 | D | L | -2.5744 | |
| 2 | I | L | 0.0000 | |
| 3 | Q | L | -2.0114 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.9417 | |
| 6 | Q | L | 0.0000 | |
| 7 | S | L | -0.6274 | |
| 8 | P | L | -0.7041 | |
| 9 | S | L | -1.0209 | |
| 10 | S | L | -1.3734 | |
| 11 | L | L | -0.9243 | |
| 12 | S | L | -1.0452 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.1904 | |
| 15 | V | L | 0.6610 | |
| 16 | G | L | -0.3935 | |
| 17 | D | L | -1.3918 | |
| 18 | R | L | -2.0988 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.6024 | |
| 21 | I | L | 0.0000 | |
| 22 | T | L | -0.5746 | |
| 23 | C | L | 0.0000 | |
| 24 | G | L | -1.3854 | |
| 25 | A | L | -1.4672 | |
| 26 | S | L | -1.6928 | |
| 27 | E | L | -1.7252 | |
| 28 | N | L | -1.2071 | |
| 29 | I | L | 0.0000 | |
| 36 | Y | L | 0.6180 | |
| 37 | G | L | 0.0655 | |
| 38 | A | L | 0.2532 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | -0.9803 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.8634 | |
| 46 | P | L | -1.2908 | |
| 47 | G | L | -1.6546 | |
| 48 | K | L | -2.6036 | |
| 49 | A | L | -1.6210 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.4434 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.0514 | |
| 56 | G | L | -0.1736 | |
| 57 | A | L | 0.0000 | |
| 65 | T | L | -0.4604 | |
| 66 | N | L | -0.7788 | |
| 67 | L | L | -0.2964 | |
| 68 | A | L | 0.0000 | |
| 69 | D | L | -1.9685 | |
| 70 | G | L | -1.2066 | |
| 71 | V | L | -0.7207 | |
| 72 | P | L | -0.4925 | |
| 74 | S | L | -0.3570 | |
| 75 | R | L | -0.7256 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.3664 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.7847 | |
| 80 | G | L | -0.8360 | |
| 83 | S | L | -0.6663 | |
| 84 | G | L | -0.7483 | |
| 85 | T | L | -1.4177 | |
| 86 | D | L | -2.1343 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6220 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | 0.0000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3254 | |
| 93 | S | L | -0.9920 | |
| 94 | L | L | 0.0000 | |
| 95 | Q | L | -0.6290 | |
| 96 | P | L | -0.6331 | |
| 97 | E | L | -1.5725 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.7901 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -1.3723 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | N | L | 0.0000 | |
| 107 | V | L | 0.0000 | |
| 108 | L | L | 0.3041 | |
| 109 | N | L | -0.6725 | |
| 114 | T | L | -0.9595 | |
| 115 | P | L | -1.3142 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | -0.8650 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -1.7403 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.4668 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | -1.5133 | |
| 126 | I | L | 0.5838 | |
| 127 | K | L | -0.9572 |