| Chain sequence(s) |
A: EKRSCPGGSSRRYPSGASCDVSGGACACYVSNCRGVLCPTLNEIVAY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:36)
[INFO] Main: Simulation completed successfully. (00:00:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -2.6035 | |
| 2 | K | A | -3.1492 | |
| 3 | R | A | -1.9662 | |
| 4 | S | A | -0.9940 | |
| 5 | C | A | -0.8431 | |
| 6 | P | A | -0.6222 | |
| 7 | G | A | -0.7775 | |
| 8 | G | A | -1.0156 | |
| 9 | S | A | -1.0276 | |
| 10 | S | A | -1.8127 | |
| 11 | R | A | -2.4157 | |
| 12 | R | A | -2.4131 | |
| 13 | Y | A | -0.9344 | |
| 14 | P | A | -0.7463 | |
| 15 | S | A | -0.7623 | |
| 16 | G | A | -0.7412 | |
| 17 | A | A | 0.0000 | |
| 18 | S | A | -1.0602 | |
| 19 | C | A | 0.0000 | |
| 20 | D | A | -1.8639 | |
| 21 | V | A | -1.2411 | |
| 22 | S | A | -1.0494 | |
| 23 | G | A | -0.9429 | |
| 24 | G | A | -1.1224 | |
| 25 | A | A | 0.0000 | |
| 26 | C | A | 0.0000 | |
| 27 | A | A | -1.5356 | |
| 28 | C | A | 0.0000 | |
| 29 | Y | A | 0.4957 | |
| 30 | V | A | 0.0694 | |
| 31 | S | A | -0.6472 | |
| 32 | N | A | -1.6867 | |
| 33 | C | A | -0.5424 | |
| 34 | R | A | -1.5601 | |
| 35 | G | A | -0.1295 | |
| 36 | V | A | 1.8984 | |
| 37 | L | A | 1.7375 | |
| 38 | C | A | 0.3327 | |
| 39 | P | A | -0.7040 | |
| 40 | T | A | -0.7188 | |
| 41 | L | A | -0.2539 | |
| 42 | N | A | -1.4141 | |
| 43 | E | A | -1.8973 | |
| 44 | I | A | 0.0000 | |
| 45 | V | A | -0.6648 | |
| 46 | A | A | -0.1443 | |
| 47 | Y | A | 0.7752 |