| Chain sequence(s) |
A: MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGRE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:03)
[INFO] Main: Simulation completed successfully. (00:03:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0209 | |
| 2 | A | A | 0.2759 | |
| 3 | S | A | 0.0416 | |
| 4 | Y | A | 0.0000 | |
| 5 | Y | A | 0.3212 | |
| 6 | E | A | -0.8788 | |
| 7 | I | A | 0.0061 | |
| 8 | L | A | 0.0000 | |
| 9 | D | A | -0.5432 | |
| 10 | V | A | 0.1781 | |
| 11 | P | A | -0.2015 | |
| 12 | R | A | -1.1831 | |
| 13 | S | A | -0.6699 | |
| 14 | A | A | -0.9053 | |
| 15 | S | A | -1.4975 | |
| 16 | A | A | -1.8585 | |
| 17 | D | A | -2.8786 | |
| 18 | D | A | -2.8289 | |
| 19 | I | A | 0.0000 | |
| 20 | K | A | -3.4106 | |
| 21 | K | A | -3.8897 | |
| 22 | A | A | 0.0000 | |
| 23 | Y | A | -2.6599 | |
| 24 | R | A | -2.9097 | |
| 25 | R | A | -2.5546 | |
| 26 | K | A | -1.3611 | |
| 27 | A | A | -1.1409 | |
| 28 | L | A | -0.3150 | |
| 29 | Q | A | -1.1050 | |
| 30 | W | A | -1.3596 | |
| 31 | H | A | -1.8742 | |
| 32 | P | A | -2.4397 | |
| 33 | D | A | -2.8118 | |
| 34 | K | A | -2.8385 | |
| 35 | N | A | -2.6269 | |
| 36 | P | A | -2.3163 | |
| 37 | D | A | -2.5616 | |
| 38 | N | A | -2.2213 | |
| 39 | K | A | -2.8996 | |
| 40 | E | A | -2.5030 | |
| 41 | F | A | -0.9173 | |
| 42 | A | A | 0.0000 | |
| 43 | E | A | -2.4669 | |
| 44 | K | A | -2.5605 | |
| 45 | K | A | -2.3381 | |
| 46 | F | A | -1.6352 | |
| 47 | K | A | -3.1440 | |
| 48 | E | A | -3.4817 | |
| 49 | V | A | 0.0000 | |
| 50 | A | A | -2.6044 | |
| 51 | E | A | -3.0858 | |
| 52 | A | A | -1.5837 | |
| 53 | Y | A | -1.9601 | |
| 54 | E | A | -2.8205 | |
| 55 | V | A | -2.1725 | |
| 56 | L | A | -1.8640 | |
| 57 | S | A | -2.3059 | |
| 58 | D | A | -3.0341 | |
| 59 | K | A | -3.6123 | |
| 60 | H | A | -2.9772 | |
| 61 | K | A | -3.1988 | |
| 62 | R | A | -3.2816 | |
| 63 | E | A | -3.3865 | |
| 64 | I | A | -1.8212 | |
| 65 | Y | A | -1.0475 | |
| 66 | D | A | -3.0201 | |
| 67 | R | A | -2.7610 | |
| 68 | Y | A | -1.0967 | |
| 69 | G | A | -2.0382 | |
| 70 | R | A | -3.0865 | |
| 71 | E | A | -2.7075 |