Project name: A?42_20

Status: done

Started: 2026-06-24 04:13:00
Settings
Chain sequence(s) A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
C: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
B: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
E: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
D: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
G: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
F: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
I: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
H: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
K: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
J: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
M: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
L: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
O: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
N: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
Q: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
P: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
S: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
R: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
T: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:29:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:29:50)
Show buried residues

Minimal score value
-2.8472
Maximal score value
2.5426
Average score
-0.6099
Total score value
-512.3159

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.0016
2 A A -1.3629
3 E A -1.9838
4 F A -0.5697
5 R A -2.4769
6 H A -2.4845
7 D A -2.7081
8 S A -2.2065
9 G A -1.5893
10 Y A -0.6764
11 E A -1.0974
12 V A 0.3335
13 H A -1.0824
14 H A -1.4660
15 Q A -0.8251
16 K A 0.0000
17 L A 1.0447
18 V A 0.5250
19 F A 0.7214
20 F A 0.4034
21 A A -0.5958
22 E A -1.9588
23 D A -1.6816
24 V A -0.9366
25 G A -1.5170
26 S A -1.5369
27 N A 0.0000
28 K A -1.3094
29 G A -0.3348
30 A A 0.0000
31 I A 0.0000
32 I A 1.8321
33 G A 0.0000
34 L A 0.0000
35 M A 1.9167
36 V A 2.5426
37 G A 0.0000
38 G A 0.0000
39 V A 0.0000
40 V A 1.0976
41 I A 1.0791
42 A A 1.2401
1 D B -1.9886
2 A B -1.3638
3 E B -1.9956
4 F B -0.5612
5 R B -2.4825
6 H B -2.4798
7 D B -2.6018
8 S B -1.7147
9 G B -1.0969
10 Y B 0.2217
11 E B -1.4170
12 V B -0.8606
13 H B -1.4990
14 H B -1.3886
15 Q B -0.7209
16 K B 0.1597
17 L B 0.8405
18 V B 1.1678
19 F B 0.0000
20 F B 1.4107
21 A B -0.6496
22 E B -1.7374
23 D B -1.0951
24 V B 0.0000
25 G B -1.3951
26 S B -1.2724
27 N B 0.0000
28 K B -0.6053
29 G B 0.0000
30 A B 0.0000
31 I B 0.0000
32 I B 0.0000
33 G B 0.0000
34 L B 0.0000
35 M B 0.0000
36 V B 0.8347
37 G B 0.7576
38 G B 1.1288
39 V B 0.0000
40 V B 0.0000
41 I B 0.0000
42 A B 0.0000
1 D C -2.0022
2 A C -1.3718
3 E C -1.9892
4 F C -0.5491
5 R C -2.4431
6 H C -2.4683
7 D C -2.7081
8 S C -2.0968
9 G C -1.5061
10 Y C -0.7622
11 E C -1.7269
12 V C -0.9038
13 H C -1.6254
14 H C -2.2615
15 Q C -1.9069
16 K C -0.4752
17 L C 0.0000
18 V C 1.5107
19 F C 0.0000
20 F C 0.9565
21 A C 0.0000
22 E C -1.8252
23 D C -1.3545
24 V C 0.0000
25 G C -1.3886
26 S C -1.3693
27 N C 0.0000
28 K C -0.8263
29 G C -0.4488
30 A C 0.0000
31 I C 0.0000
32 I C 0.4344
33 G C 0.0000
34 L C 0.0000
35 M C 0.0000
36 V C 1.0016
37 G C 0.0000
38 G C 0.7532
39 V C 0.0000
40 V C 0.5869
41 I C 0.0000
42 A C 0.2139
1 D D -2.0115
2 A D -1.3584
3 E D -1.9825
4 F D -0.5225
5 R D -2.4199
6 H D -2.4565
7 D D -2.6704
8 S D -1.8214
9 G D -1.2636
10 Y D -0.5076
11 E D -1.2296
12 V D 0.0146
13 H D -1.2063
14 H D -2.1590
15 Q D -2.4548
16 K D -1.5246
17 L D 0.0000
18 V D 0.8772
19 F D 0.0000
20 F D 0.3826
21 A D -0.6452
22 E D -1.9194
23 D D -1.5829
24 V D 0.0000
25 G D -1.5426
26 S D -1.4014
27 N D 0.0000
28 K D -0.9872
29 G D -0.4764
30 A D 0.0000
31 I D 0.0000
32 I D 0.7094
33 G D 0.0000
34 L D 0.0000
35 M D 0.0000
36 V D 1.2707
37 G D 0.0000
38 G D 0.7279
39 V D 0.0000
40 V D 0.5448
41 I D 0.0000
42 A D 0.0000
1 D E -1.9919
2 A E -1.3700
3 E E -1.9587
4 F E -0.5191
5 R E -2.4092
6 H E -2.4552
7 D E -2.6511
8 S E -1.7854
9 G E -1.3190
10 Y E -0.4219
11 E E -1.7374
12 V E -1.4609
13 H E -2.2503
14 H E -2.8472
15 Q E -2.5572
16 K E -2.1453
17 L E 0.0000
18 V E 0.4531
19 F E 0.0000
20 F E 0.9163
21 A E 0.0000
22 E E -1.9069
23 D E 0.0000
24 V E 0.0000
25 G E -1.3361
26 S E -1.4776
27 N E 0.0000
28 K E -0.9480
29 G E 0.0000
30 A E 0.0000
31 I E 0.0000
32 I E 0.6768
33 G E 0.0000
34 L E 0.0000
35 M E 0.0000
36 V E 1.1163
37 G E 0.0000
38 G E 0.4743
39 V E 0.0000
40 V E 0.5825
41 I E 0.0000
42 A E 0.0000
1 D F -1.9977
2 A F -1.3721
3 E F -1.9745
4 F F -0.5260
5 R F -2.4353
6 H F -2.4724
7 D F -2.6045
8 S F -1.6485
9 G F -1.0395
10 Y F -0.3229
11 E F -1.7292
12 V F -1.4156
13 H F -1.7813
14 H F -1.9415
15 Q F -1.7455
16 K F 0.0000
17 L F 0.3636
18 V F 0.4802
19 F F 0.0000
20 F F 0.4308
21 A F -0.8517
22 E F -2.1069
23 D F -1.3270
24 V F 0.0000
25 G F -1.6718
26 S F -1.6168
27 N F 0.0000
28 K F -1.3039
29 G F 0.0000
30 A F 0.0000
31 I F 0.0000
32 I F 0.4557
33 G F 0.0000
34 L F 0.0000
35 M F 0.0000
36 V F 0.8604
37 G F 0.4929
38 G F 0.2041
39 V F 0.0000
40 V F 0.6710
41 I F 0.0000
42 A F 0.0000
1 D G -2.0024
2 A G -1.3810
3 E G -1.9695
4 F G -0.5250
5 R G -2.4214
6 H G -2.4519
7 D G -2.6059
8 S G -1.6246
9 G G -1.0233
10 Y G -0.2191
11 E G -1.4820
12 V G -1.3370
13 H G -1.6884
14 H G -1.6224
15 Q G -1.1311
16 K G -0.2406
17 L G 0.0000
18 V G 2.3672
19 F G 1.8122
20 F G 1.9485
21 A G -0.3401
22 E G -1.8272
23 D G -1.4612
24 V G 0.0000
25 G G -1.5499
26 S G -1.3756
27 N G 0.0000
28 K G -1.0838
29 G G -0.4971
30 A G 0.0000
31 I G 0.0000
32 I G 0.5175
33 G G 0.0000
34 L G 0.0000
35 M G 0.0000
36 V G 0.8707
37 G G 0.0000
38 G G 0.2116
39 V G 0.0000
40 V G 1.0125
41 I G 0.0000
42 A G 0.5996
1 D H -1.9984
2 A H -1.3691
3 E H -1.9560
4 F H -0.5135
5 R H -2.4229
6 H H -2.4538
7 D H -2.6677
8 S H -1.7523
9 G H -1.2621
10 Y H -0.3697
11 E H -1.5402
12 V H -1.6537
13 H H -2.3712
14 H H -2.2627
15 Q H -2.5215
16 K H -1.7848
17 L H -0.3102
18 V H 0.4546
19 F H 0.0000
20 F H 0.4914
21 A H -0.6601
22 E H -2.1318
23 D H -1.4237
24 V H 0.0000
25 G H -1.3248
26 S H -1.3609
27 N H 0.0000
28 K H -0.8350
29 G H -0.5146
30 A H 0.0000
31 I H 0.0000
32 I H 0.3252
33 G H 0.0000
34 L H 0.0000
35 M H 0.0000
36 V H 0.8316
37 G H 0.0000
38 G H 0.2502
39 V H 0.0000
40 V H 0.6886
41 I H 0.0000
42 A H 0.0000
1 D I -1.9734
2 A I -1.3564
3 E I -1.9374
4 F I -0.5303
5 R I -2.4687
6 H I -2.4818
7 D I -2.6289
8 S I -1.6493
9 G I -0.9610
10 Y I -0.0758
11 E I -1.1048
12 V I -0.3402
13 H I -1.2815
14 H I -2.1212
15 Q I -1.5521
16 K I -1.1899
17 L I 0.1558
18 V I 0.9828
19 F I 0.9352
20 F I 0.9420
21 A I -0.7379
22 E I -1.9237
23 D I -1.7618
24 V I 0.0000
25 G I -1.5805
26 S I -1.5892
27 N I 0.0000
28 K I -1.1746
29 G I -0.6522
30 A I 0.0000
31 I I 0.0000
32 I I 0.3817
33 G I 0.0000
34 L I 0.0000
35 M I 0.0000
36 V I 0.8893
37 G I 0.0000
38 G I 0.2973
39 V I 0.0000
40 V I 0.8067
41 I I 0.0000
42 A I 0.3542
1 D J -2.0147
2 A J -1.3962
3 E J -1.9869
4 F J -0.5086
5 R J -2.4245
6 H J -2.4550
7 D J -2.6939
8 S J -2.0382
9 G J -1.3666
10 Y J -0.7598
11 E J -1.4962
12 V J -0.5741
13 H J -1.3179
14 H J -1.7353
15 Q J -2.4497
16 K J -1.2419
17 L J 0.0000
18 V J 0.5796
19 F J 0.0000
20 F J 0.4198
21 A J -0.9353
22 E J -1.9749
23 D J -1.6781
24 V J 0.0000
25 G J -1.5197
26 S J -1.1532
27 N J 0.0000
28 K J -1.1255
29 G J -0.6646
30 A J 0.0000
31 I J 0.0000
32 I J 0.4525
33 G J 0.0000
34 L J 0.0000
35 M J 0.0000
36 V J 1.0169
37 G J 0.0000
38 G J 0.3535
39 V J 0.0000
40 V J 0.7854
41 I J 0.0000
42 A J 0.0000
1 D K -2.0124
2 A K -1.3824
3 E K -1.9842
4 F K -0.5373
5 R K -2.4167
6 H K -2.4572
7 D K -2.7227
8 S K -2.1923
9 G K -1.7249
10 Y K -0.9229
11 E K -1.4765
12 V K 0.1365
13 H K -1.0740
14 H K -2.0673
15 Q K -2.2969
16 K K -2.1560
17 L K 0.0000
18 V K 0.1522
19 F K 0.3866
20 F K 0.1541
21 A K -0.9121
22 E K -2.0780
23 D K -1.5872
24 V K 0.0000
25 G K -1.4995
26 S K -1.0575
27 N K 0.0000
28 K K -1.2271
29 G K -0.5423
30 A K 0.0000
31 I K 0.0000
32 I K 0.4643
33 G K 0.0000
34 L K 0.0000
35 M K 0.0000
36 V K 0.9112
37 G K 0.0000
38 G K 0.3128
39 V K 0.0000
40 V K 0.7718
41 I K 0.0000
42 A K -0.2488
1 D L -2.0203
2 A L -1.4218
3 E L -1.9947
4 F L -0.5639
5 R L -2.4299
6 H L -2.4562
7 D L -2.6011
8 S L -1.6845
9 G L -0.9629
10 Y L 0.2357
11 E L -0.9329
12 V L 0.0937
13 H L -1.4076
14 H L -2.1140
15 Q L -1.9969
16 K L -1.8848
17 L L 0.4131
18 V L 1.0818
19 F L 0.9347
20 F L 0.7585
21 A L -0.5424
22 E L -2.4487
23 D L -1.7491
24 V L 0.0000
25 G L -1.5045
26 S L -1.0914
27 N L 0.0000
28 K L 0.0000
29 G L 0.0000
30 A L 0.0000
31 I L 0.0000
32 I L 0.0000
33 G L 0.0000
34 L L 0.0000
35 M L 0.0000
36 V L 0.7582
37 G L 0.6700
38 G L 0.7559
39 V L 1.0728
40 V L 0.9084
41 I L 1.1933
42 A L 0.9624
1 D M -2.0270
2 A M -1.4248
3 E M -1.9934
4 F M -0.5609
5 R M -2.4029
6 H M -2.4538
7 D M -2.6450
8 S M -1.8095
9 G M -1.3816
10 Y M -0.4117
11 E M -1.5229
12 V M -0.3354
13 H M -1.3154
14 H M -1.9140
15 Q M -1.9389
16 K M -1.3808
17 L M 1.1012
18 V M 1.3813
19 F M 1.7509
20 F M 1.6275
21 A M -0.4292
22 E M -1.6790
23 D M -0.7878
24 V M -0.8788
25 G M -1.4314
26 S M -1.1068
27 N M 0.0000
28 K M -1.0903
29 G M -0.5909
30 A M 0.0000
31 I M 0.0000
32 I M 0.5433
33 G M 0.0000
34 L M 0.0000
35 M M 0.0000
36 V M 1.0037
37 G M 0.5033
38 G M 0.5596
39 V M 1.0772
40 V M 1.3728
41 I M 0.0000
42 A M 0.0000
1 D N -2.0021
2 A N -1.4059
3 E N -1.9722
4 F N -0.5671
5 R N -2.5427
6 H N -2.5032
7 D N -2.6592
8 S N -1.7802
9 G N -1.0876
10 Y N -0.0004
11 E N -1.1079
12 V N 0.1207
13 H N -1.3012
14 H N -1.5645
15 Q N -1.1192
16 K N -0.0470
17 L N 0.4845
18 V N 1.0534
19 F N 1.1369
20 F N 1.3892
21 A N -0.5627
22 E N -1.6627
23 D N -1.0469
24 V N 0.0000
25 G N -1.6009
26 S N -1.7489
27 N N 0.0000
28 K N -1.9932
29 G N -0.9564
30 A N 0.0000
31 I N 0.0000
32 I N 0.5430
33 G N 0.0000
34 L N 0.0000
35 M N 0.0000
36 V N 1.2179
37 G N 0.8084
38 G N 0.4436
39 V N 0.0000
40 V N 0.9350
41 I N 0.0000
42 A N 0.4655
1 D O -1.9897
2 A O -1.3787
3 E O -1.9780
4 F O -0.5881
5 R O -2.5400
6 H O -2.5044
7 D O -2.6237
8 S O -2.0283
9 G O -0.9411
10 Y O 0.2490
11 E O -0.8527
12 V O 0.6833
13 H O -0.5935
14 H O -0.7944
15 Q O -0.9913
16 K O -0.9517
17 L O 0.5211
18 V O 1.6993
19 F O 1.4855
20 F O 1.5185
21 A O -0.8994
22 E O -1.8996
23 D O -1.5733
24 V O 0.0000
25 G O -1.6146
26 S O -1.7578
27 N O 0.0000
28 K O -1.7998
29 G O -0.9235
30 A O 0.0000
31 I O 0.0000
32 I O 0.7436
33 G O 0.0000
34 L O 0.0000
35 M O 0.0000
36 V O 1.2922
37 G O 0.7778
38 G O 0.4259
39 V O 0.0000
40 V O 0.7254
41 I O 0.0000
42 A O -0.0665
1 D P -1.9741
2 A P -1.3894
3 E P -1.9485
4 F P -0.5844
5 R P -2.5408
6 H P -2.4992
7 D P -2.6530
8 S P -1.7498
9 G P -0.9897
10 Y P 0.0415
11 E P -0.9668
12 V P 0.4415
13 H P -1.3625
14 H P -2.0063
15 Q P -2.0087
16 K P -1.7886
17 L P 0.2720
18 V P 1.8966
19 F P 1.1542
20 F P 1.4056
21 A P -0.9098
22 E P -2.2756
23 D P -2.4738
24 V P 0.0000
25 G P -2.1973
26 S P -1.8939
27 N P -1.8956
28 K P -2.2954
29 G P -1.0507
30 A P 0.0000
31 I P 0.0000
32 I P 0.4094
33 G P 0.0000
34 L P 0.0000
35 M P 0.0000
36 V P 1.2588
37 G P 0.7905
38 G P 0.3724
39 V P 0.0000
40 V P 0.6345
41 I P 0.0000
42 A P 0.1897
1 D Q -1.9928
2 A Q -1.3406
3 E Q -1.9557
4 F Q -0.4676
5 R Q -2.4271
6 H Q -2.4482
7 D Q -2.5976
8 S Q -1.6926
9 G Q -0.9588
10 Y Q 0.4740
11 E Q -0.5778
12 V Q -0.1625
13 H Q -1.2604
14 H Q -1.4238
15 Q Q -1.0339
16 K Q -0.8878
17 L Q 0.0000
18 V Q 1.8048
19 F Q 1.9085
20 F Q 1.8393
21 A Q -0.0958
22 E Q -1.6319
23 D Q -0.9436
24 V Q 0.0000
25 G Q -1.3157
26 S Q -1.1280
27 N Q -0.9836
28 K Q -1.1351
29 G Q -0.4252
30 A Q 0.0000
31 I Q 0.0000
32 I Q 0.4132
33 G Q 0.0000
34 L Q 0.0000
35 M Q 0.0000
36 V Q 0.9077
37 G Q 0.0000
38 G Q 0.4175
39 V Q 0.0000
40 V Q 0.7594
41 I Q 0.0000
42 A Q 0.9668
1 D R -1.9866
2 A R -1.3474
3 E R -1.9732
4 F R -0.5241
5 R R -2.4635
6 H R -2.4911
7 D R -2.6096
8 S R -1.7263
9 G R -1.0186
10 Y R 0.2123
11 E R -0.9984
12 V R 0.3639
13 H R -1.2179
14 H R -2.1431
15 Q R -1.4425
16 K R -0.8925
17 L R 1.5433
18 V R 2.0462
19 F R 1.1755
20 F R 0.9493
21 A R 0.0000
22 E R -2.2695
23 D R -2.1931
24 V R 0.0000
25 G R -1.6158
26 S R -1.6786
27 N R -1.3964
28 K R -1.1508
29 G R 0.0000
30 A R -0.1087
31 I R 0.0000
32 I R 0.0000
33 G R 0.0000
34 L R 0.8605
35 M R 0.8682
36 V R 0.6184
37 G R 0.6980
38 G R 0.4202
39 V R 1.3827
40 V R 2.2832
41 I R 2.1073
42 A R 0.0000
1 D S -2.0228
2 A S -1.4270
3 E S -2.0053
4 F S -0.5794
5 R S -2.4120
6 H S -2.4451
7 D S -2.7023
8 S S -2.2457
9 G S -1.6358
10 Y S -0.8312
11 E S -1.6607
12 V S -0.4683
13 H S -1.7389
14 H S -2.4420
15 Q S -2.5048
16 K S -1.2406
17 L S 0.0000
18 V S 0.8091
19 F S 1.0331
20 F S 0.5439
21 A S -0.2927
22 E S -1.7746
23 D S -1.4972
24 V S 0.0000
25 G S -1.1957
26 S S -1.1308
27 N S -1.3775
28 K S 0.0000
29 G S -0.6196
30 A S -0.0095
31 I S 0.0000
32 I S 0.0000
33 G S 0.0000
34 L S 0.0000
35 M S 0.0000
36 V S 1.5111
37 G S 1.2330
38 G S 0.9298
39 V S 0.0000
40 V S 1.3575
41 I S 0.0000
42 A S 0.2981
1 D T -1.9865
2 A T -1.3715
3 E T -1.9897
4 F T -0.5579
5 R T -2.4959
6 H T -2.4841
7 D T -2.6161
8 S T -1.7058
9 G T -1.0168
10 Y T 0.2162
11 E T -1.0850
12 V T 0.3894
13 H T -1.1943
14 H T -2.1069
15 Q T -1.6526
16 K T -0.5266
17 L T 1.7082
18 V T 1.5912
19 F T 1.3868
20 F T 1.5386
21 A T -0.3772
22 E T -2.1778
23 D T -2.2060
24 V T -1.2967
25 G T -1.8120
26 S T -2.2596
27 N T -2.1189
28 K T -1.8186
29 G T -0.7683
30 A T -0.3135
31 I T 0.0000
32 I T 1.0049
33 G T 0.9517
34 L T 1.2806
35 M T 0.0000
36 V T 2.1094
37 G T 1.1322
38 G T 1.0523
39 V T 1.8558
40 V T 1.8195
41 I T 1.7634
42 A T 1.3804
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Laboratory of Theory of Biopolymers 2018