| Chain sequence(s) |
A: MRPPQFTRAQWFAIQHISLNPPRCTIAMRAINNYRWRCKNQNTFLRTTFANVVNVCGNQSIRCPHNRTLNNCHRSRFRVPLLHCDLINPGAQNISNCRYADRPGRRFYVVACDNRDPRDSPRYPVVPVHLDTTI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:05)
[INFO] Main: Simulation completed successfully. (00:02:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | M | A | 0.9240 | |
| 1 | R | A | -0.4955 | |
| 2 | P | A | 0.0000 | |
| 3 | P | A | -0.4734 | |
| 4 | Q | A | -1.1807 | |
| 5 | F | A | 0.1330 | |
| 6 | T | A | 0.0000 | |
| 7 | R | A | -0.8618 | |
| 8 | A | A | 0.0000 | |
| 9 | Q | A | -0.7145 | |
| 10 | W | A | -0.0090 | |
| 11 | F | A | 0.0000 | |
| 12 | A | A | 0.1805 | |
| 13 | I | A | 0.7562 | |
| 14 | Q | A | 0.0071 | |
| 15 | H | A | 0.0000 | |
| 16 | I | A | 0.2224 | |
| 17 | S | A | 0.2804 | |
| 18 | L | A | 1.1821 | |
| 19 | N | A | -0.9917 | |
| 20 | P | A | -0.3056 | |
| 21 | P | A | -0.5300 | |
| 22 | R | A | -1.8780 | |
| 23 | C | A | 0.0000 | |
| 24 | T | A | 0.1750 | |
| 25 | I | A | 1.0007 | |
| 26 | A | A | 0.1911 | |
| 27 | M | A | 0.0000 | |
| 28 | R | A | -1.8350 | |
| 29 | A | A | -0.2903 | |
| 30 | I | A | 0.0000 | |
| 31 | N | A | -0.5215 | |
| 32 | N | A | -1.1700 | |
| 33 | Y | A | 0.2864 | |
| 34 | R | A | -0.7548 | |
| 35 | W | A | 0.7513 | |
| 36 | R | A | -1.0430 | |
| 37 | C | A | 0.0000 | |
| 38 | K | A | -0.5068 | |
| 39 | N | A | -1.5274 | |
| 40 | Q | A | -1.3478 | |
| 41 | N | A | 0.0000 | |
| 42 | T | A | -0.0250 | |
| 43 | F | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | R | A | -0.5492 | |
| 46 | T | A | 0.0000 | |
| 47 | T | A | 0.0648 | |
| 48 | F | A | 0.4740 | |
| 49 | A | A | -0.0487 | |
| 50 | N | A | -0.8926 | |
| 51 | V | A | 0.0000 | |
| 52 | V | A | -0.0505 | |
| 53 | N | A | -1.2398 | |
| 54 | V | A | 0.0000 | |
| 55 | C | A | 0.0000 | |
| 56 | G | A | -0.6054 | |
| 57 | N | A | -1.0537 | |
| 58 | Q | A | -1.3591 | |
| 59 | S | A | -0.2064 | |
| 60 | I | A | 0.3596 | |
| 61 | R | A | -1.9170 | |
| 62 | C | A | 0.0000 | |
| 63 | P | A | -0.2699 | |
| 64 | H | A | -1.1498 | |
| 65 | N | A | -1.3174 | |
| 66 | R | A | -2.0056 | |
| 67 | T | A | -0.2821 | |
| 68 | L | A | 0.4422 | |
| 69 | N | A | -1.5284 | |
| 70 | N | A | -0.6902 | |
| 71 | C | A | 0.0000 | |
| 72 | H | A | 0.0000 | |
| 73 | R | A | -0.6925 | |
| 74 | S | A | 0.0000 | |
| 75 | R | A | -1.7342 | |
| 76 | F | A | -0.1004 | |
| 77 | R | A | -1.9315 | |
| 78 | V | A | 0.0000 | |
| 79 | P | A | -0.4299 | |
| 80 | L | A | 0.0000 | |
| 81 | L | A | 0.1096 | |
| 82 | H | A | -0.2396 | |
| 83 | C | A | 0.0000 | |
| 84 | D | A | -0.3660 | |
| 85 | L | A | 0.4998 | |
| 86 | I | A | 1.9696 | |
| 87 | N | A | 0.1660 | |
| 88 | P | A | -0.3680 | |
| 89 | G | A | -0.5029 | |
| 90 | A | A | -0.1889 | |
| 91 | Q | A | -1.1048 | |
| 92 | N | A | -1.2376 | |
| 93 | I | A | 0.7707 | |
| 94 | S | A | -0.2531 | |
| 95 | N | A | -1.2979 | |
| 96 | C | A | -0.5009 | |
| 97 | R | A | -1.8297 | |
| 98 | Y | A | 0.0000 | |
| 99 | A | A | -0.0413 | |
| 100 | D | A | -0.6179 | |
| 101 | R | A | -1.3510 | |
| 102 | P | A | -0.4861 | |
| 103 | G | A | -0.5436 | |
| 104 | R | A | -2.1999 | |
| 105 | R | A | -2.1934 | |
| 106 | F | A | -0.3294 | |
| 107 | Y | A | 0.0000 | |
| 108 | V | A | 0.0000 | |
| 109 | V | A | 0.0000 | |
| 110 | A | A | 0.0000 | |
| 111 | C | A | 0.0000 | |
| 112 | D | A | -1.0713 | |
| 113 | N | A | -1.3882 | |
| 114 | R | A | -0.6357 | |
| 115 | D | A | -0.5219 | |
| 116 | P | A | -0.6632 | |
| 117 | R | A | -1.9228 | |
| 118 | D | A | -0.5350 | |
| 119 | S | A | -0.1826 | |
| 120 | P | A | -0.6164 | |
| 121 | R | A | -1.8128 | |
| 122 | Y | A | 0.0528 | |
| 123 | P | A | -0.0322 | |
| 124 | V | A | 0.5744 | |
| 125 | V | A | 0.0000 | |
| 126 | P | A | 0.0000 | |
| 127 | V | A | 0.0823 | |
| 128 | H | A | -0.9069 | |
| 129 | L | A | -0.0363 | |
| 130 | D | A | -0.2087 | |
| 131 | T | A | -0.0591 | |
| 132 | T | A | 0.2989 | |
| 133 | I | A | 1.7100 |