| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRLSCAASGFPFSNYWMNWVRQAPGKGLEWVGQIRLKSNNYATHYAESVKGRFTISRDDSKNSLYLQMNSLKTEDTAVYYCTPIDYWGQGTTVTVSS
L: DIVMTQTPLSLSVTPGQPASISCKSSQSLLYSNGKTYLNWVLQKPGQSPQRLIYLVSKLDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCVQGSHFHTFGQGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:45)
[INFO] Main: Simulation completed successfully. (00:01:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.8806 | |
| 2 | V | H | -0.7856 | |
| 3 | Q | H | -0.6874 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.2562 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.3647 | |
| 8 | G | H | -0.9411 | |
| 9 | G | H | -0.4039 | |
| 11 | G | H | 0.3572 | |
| 12 | L | H | 1.1032 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.3688 | |
| 15 | P | H | -1.5617 | |
| 16 | G | H | -1.3565 | |
| 17 | G | H | 0.0000 | |
| 18 | S | H | -1.1799 | |
| 19 | L | H | -0.9140 | |
| 20 | R | H | -1.8487 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2748 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.0223 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.7987 | |
| 27 | G | H | -1.0750 | |
| 28 | F | H | -0.5483 | |
| 29 | P | H | -0.6751 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -1.4994 | |
| 36 | N | H | -1.4515 | |
| 37 | Y | H | -0.1884 | |
| 38 | W | H | 0.0053 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.7931 | |
| 45 | A | H | -1.2054 | |
| 46 | P | H | -1.1655 | |
| 47 | G | H | -1.4583 | |
| 48 | K | H | -2.3488 | |
| 49 | G | H | -1.5387 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0321 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | Q | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | R | H | -0.8668 | |
| 58 | L | H | -1.4197 | |
| 59 | K | H | -2.5188 | |
| 60 | S | H | -1.7752 | |
| 61 | N | H | -1.6990 | |
| 62 | N | H | -2.0560 | |
| 63 | Y | H | -1.1043 | |
| 64 | A | H | -0.7428 | |
| 65 | T | H | -0.1568 | |
| 66 | H | H | -0.4291 | |
| 67 | Y | H | -0.9037 | |
| 68 | A | H | -1.5680 | |
| 69 | E | H | -2.7071 | |
| 70 | S | H | -1.8000 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.6245 | |
| 74 | G | H | -1.7367 | |
| 75 | R | H | -1.6132 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8663 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2999 | |
| 80 | R | H | -1.0337 | |
| 81 | D | H | -1.5496 | |
| 82 | D | H | -2.0130 | |
| 83 | S | H | -1.5788 | |
| 84 | K | H | -2.4003 | |
| 85 | N | H | -1.8282 | |
| 86 | S | H | -0.9953 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4202 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.1795 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.3480 | |
| 93 | S | H | -1.1588 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.2665 | |
| 96 | T | H | -1.8069 | |
| 97 | E | H | -2.2948 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7051 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.1496 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | T | H | 0.0000 | |
| 106 | P | H | 0.0000 | |
| 107 | I | H | 0.0000 | |
| 116 | D | H | -0.1741 | |
| 117 | Y | H | 0.1516 | |
| 118 | W | H | -0.0619 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0748 | |
| 121 | G | H | -0.3948 | |
| 122 | T | H | -0.1644 | |
| 123 | T | H | -0.0023 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.0765 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7420 | |
| 128 | S | H | -0.5085 | |
| 1 | D | L | -1.7709 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7567 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.4411 | |
| 6 | Q | L | 0.0000 | |
| 7 | T | L | 0.0372 | |
| 8 | P | L | 0.3559 | |
| 9 | L | L | 1.0806 | |
| 10 | S | L | 0.0796 | |
| 11 | L | L | -0.2005 | |
| 12 | S | L | -0.9442 | |
| 13 | V | L | 0.0000 | |
| 14 | T | L | -1.5400 | |
| 15 | P | L | -1.5234 | |
| 16 | G | L | -1.6239 | |
| 17 | Q | L | -1.8766 | |
| 18 | P | L | -1.5738 | |
| 19 | A | L | 0.0000 | |
| 20 | S | L | -0.7241 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.8218 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -1.6215 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.8362 | |
| 27 | Q | L | -1.4889 | |
| 28 | S | L | -0.6855 | |
| 29 | L | L | 0.0000 | |
| 30 | L | L | 0.8463 | |
| 31 | Y | L | 0.2098 | |
| 32 | S | L | -0.5763 | |
| 34 | N | L | -1.5109 | |
| 35 | G | L | -1.0834 | |
| 36 | K | L | -0.9259 | |
| 37 | T | L | 0.1591 | |
| 38 | Y | L | 0.5229 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | V | L | 0.0000 | |
| 43 | L | L | 0.0000 | |
| 44 | Q | L | -1.0892 | |
| 45 | K | L | -1.6518 | |
| 46 | P | L | -1.0436 | |
| 47 | G | L | -1.3571 | |
| 48 | Q | L | -2.1120 | |
| 49 | S | L | -1.4491 | |
| 50 | P | L | 0.0000 | |
| 51 | Q | L | -1.2969 | |
| 52 | R | L | -0.5203 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | 0.1882 | |
| 56 | L | L | 0.0702 | |
| 57 | V | L | 0.0000 | |
| 65 | S | L | -0.5033 | |
| 66 | K | L | -0.8040 | |
| 67 | L | L | -0.4023 | |
| 68 | D | L | -0.5067 | |
| 69 | S | L | -0.5077 | |
| 70 | G | L | -0.6694 | |
| 71 | V | L | -0.5841 | |
| 72 | P | L | -0.9734 | |
| 74 | D | L | -1.9297 | |
| 75 | R | L | 0.0000 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.1285 | |
| 78 | G | L | -0.6863 | |
| 79 | S | L | -0.9374 | |
| 80 | G | L | -1.0647 | |
| 83 | S | L | -0.6834 | |
| 84 | G | L | -0.4826 | |
| 85 | T | L | -1.2825 | |
| 86 | D | L | -1.9842 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.9982 | |
| 89 | L | L | 0.0000 | |
| 90 | K | L | -1.6003 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.7200 | |
| 93 | R | L | -2.1938 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.5636 | |
| 96 | A | L | -1.3393 | |
| 97 | E | L | -1.8861 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.8592 | |
| 100 | G | L | 0.0000 | |
| 101 | V | L | -0.2127 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | V | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | G | L | 0.1653 | |
| 108 | S | L | 0.0000 | |
| 114 | H | L | -0.6897 | |
| 115 | F | L | -0.0133 | |
| 116 | H | L | 0.0000 | |
| 117 | T | L | -0.0787 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | Q | L | -0.9085 | |
| 121 | G | L | 0.0000 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.6759 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.5154 | |
| 126 | I | L | -1.2380 | |
| 127 | K | L | -1.8746 |