Project name: C11

Status: done

Started: 2025-06-25 13:58:01
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Chain sequence(s) H: DVQLQESGGGLVQPGGSLRLSCAASGFTFSSSQMSWVRRAPGKGLEWISAVTRDAGRTYYADSVKGRFTISGDNAKNTLYLQMNSLRPEDTAMYYCVARAAWDSGYREQGIWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:03)
Show buried residues

Minimal score value
-3.1816
Maximal score value
1.1617
Average score
-0.7866
Total score value
-95.967

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D H -1.8752
2 V H -0.7690
3 Q H -1.6624
4 L H 0.0000
5 Q H -1.6289
6 E H 0.0000
7 S H -1.0195
8 G H -1.0087
9 G H -0.5658
11 G H 0.2247
12 L H 1.1617
13 V H 0.0588
14 Q H -1.2632
15 P H -1.6353
16 G H -1.3131
17 G H -0.8608
18 S H -1.0472
19 L H -0.6174
20 R H -1.5035
21 L H 0.0000
22 S H -0.5913
23 C H 0.0000
24 A H -0.9519
25 A H 0.0000
26 S H -1.1784
27 G H -0.9482
28 F H -0.0539
29 T H -0.4564
30 F H 0.0000
35 S H -1.5966
36 S H -0.8307
37 S H 0.0000
38 Q H -1.1733
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 R H -1.4597
45 A H 0.0000
46 P H -1.4673
47 G H -1.5704
48 K H -2.3665
49 G H -1.3882
50 L H -0.2742
51 E H -0.5261
52 W H 0.4002
53 I H 0.0000
54 S H 0.0000
55 A H 0.0000
56 V H 0.0000
57 T H 0.0000
58 R H -2.9589
59 D H -3.1816
62 A H -2.3076
63 G H -1.9626
64 R H -2.3184
65 T H -0.7132
66 Y H 0.2798
67 Y H -0.3718
68 A H -1.0742
69 D H -2.4252
70 S H -1.8327
71 V H 0.0000
72 K H -2.5283
74 G H -1.7933
75 R H -1.6155
76 F H 0.0000
77 T H -0.6923
78 I H 0.0000
79 S H -0.7453
80 G H -1.5216
81 D H -1.9868
82 N H -2.3072
83 A H -1.4081
84 K H -2.2751
85 N H -1.6870
86 T H -1.1626
87 L H 0.0000
88 Y H -0.2193
89 L H 0.0000
90 Q H -1.0541
91 M H 0.0000
92 N H -1.2758
93 S H -1.1970
94 L H 0.0000
95 R H -2.2531
96 P H -1.8079
97 E H -2.3330
98 D H 0.0000
99 T H -0.8968
100 A H 0.0000
101 M H -0.4273
102 Y H 0.0000
103 Y H -0.2501
104 C H 0.0000
105 V H 0.0000
106 A H 0.0000
107 R H -0.7444
108 A H -0.4396
109 A H -0.2755
110 W H 0.7472
111 D H -0.4630
111A S H -0.2813
112A G H -0.5338
112 Y H -0.0077
113 R H -1.5491
114 E H -2.2057
115 Q H -1.2765
116 G H -0.9442
117 I H -0.0871
118 W H -0.2064
119 G H -0.8550
120 Q H -1.4872
121 G H 0.0000
122 T H -0.8607
123 Q H -0.7791
124 V H 0.0000
125 T H -0.1841
126 V H 0.0000
127 S H -0.6554
128 S H -0.8168
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Laboratory of Theory of Biopolymers 2018