| Chain sequence(s) |
A: AENKFNKEMRNAYWEIALLPNLNNQQKRAFIRSLYDDPSQSANLLAEAKKLSESQAPGGGC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -1.3960 | |
| 2 | E | A | -2.7460 | |
| 3 | N | A | -2.6524 | |
| 4 | K | A | -2.9086 | |
| 5 | F | A | -1.3854 | |
| 6 | N | A | -3.0185 | |
| 7 | K | A | -3.5157 | |
| 8 | E | A | -3.5612 | |
| 9 | M | A | 0.0000 | |
| 10 | R | A | -2.4784 | |
| 11 | N | A | -2.4838 | |
| 12 | A | A | 0.0000 | |
| 13 | Y | A | -0.4310 | |
| 14 | W | A | 0.4489 | |
| 15 | E | A | -0.2069 | |
| 16 | I | A | 0.0000 | |
| 17 | A | A | 0.2250 | |
| 18 | L | A | 1.5256 | |
| 19 | L | A | -0.0383 | |
| 20 | P | A | -0.5913 | |
| 21 | N | A | -1.2472 | |
| 22 | L | A | 0.0000 | |
| 23 | N | A | -2.7729 | |
| 24 | N | A | -3.1578 | |
| 25 | Q | A | -3.0154 | |
| 26 | Q | A | -2.4308 | |
| 27 | K | A | -2.4231 | |
| 28 | R | A | -3.3294 | |
| 29 | A | A | -2.0832 | |
| 30 | F | A | 0.0000 | |
| 31 | I | A | -1.1882 | |
| 32 | R | A | -2.3591 | |
| 33 | S | A | -1.6750 | |
| 34 | L | A | 0.0000 | |
| 35 | Y | A | -0.2645 | |
| 36 | D | A | -2.0647 | |
| 37 | D | A | -1.6434 | |
| 38 | P | A | -1.5296 | |
| 39 | S | A | -1.3532 | |
| 40 | Q | A | -1.6189 | |
| 41 | S | A | 0.0000 | |
| 42 | A | A | -1.4039 | |
| 43 | N | A | -1.8908 | |
| 44 | L | A | -1.4309 | |
| 45 | L | A | -1.1990 | |
| 46 | A | A | -1.8205 | |
| 47 | E | A | -2.8927 | |
| 48 | A | A | 0.0000 | |
| 49 | K | A | -2.7605 | |
| 50 | K | A | -3.2194 | |
| 51 | L | A | -1.8811 | |
| 52 | S | A | 0.0000 | |
| 53 | E | A | -3.1650 | |
| 54 | S | A | -1.9871 | |
| 55 | Q | A | -1.8924 | |
| 56 | A | A | -1.6076 | |
| 57 | P | A | -1.0845 | |
| 58 | G | A | -1.0939 | |
| 59 | G | A | -1.1042 | |
| 60 | G | A | -1.2036 | |
| 61 | C | A | 0.0412 |