| Chain sequence(s) |
A: PGVKPIRLFFGQQRRDVYPSALRRLLRFIAPDLVITHMEAHVNEATGRGKGCAWVIVPSVLEAKRLLRLSGRIFLDINSNGEEVYLFAPPNCREWLSEYADYVVSSTTRASHLPYLPMVVGVPKKECIYVRELLAPYIYDPNRGDCPPYADAVSEFKGLLEDHASLPV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:15)
[INFO] Main: Simulation completed successfully. (00:04:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | 0.5729 | |
| 2 | G | A | 0.9158 | |
| 3 | V | A | 1.4702 | |
| 4 | K | A | -0.1426 | |
| 5 | P | A | -0.3726 | |
| 6 | I | A | 0.0000 | |
| 7 | R | A | -0.7538 | |
| 8 | L | A | 0.0000 | |
| 9 | F | A | 1.0152 | |
| 10 | F | A | 0.0000 | |
| 11 | G | A | 0.2984 | |
| 12 | Q | A | -0.1165 | |
| 13 | Q | A | -0.8784 | |
| 14 | R | A | -1.4363 | |
| 15 | R | A | -2.6310 | |
| 16 | D | A | -1.3398 | |
| 17 | V | A | -0.3747 | |
| 18 | Y | A | 0.4509 | |
| 19 | P | A | -0.8338 | |
| 20 | S | A | -0.9770 | |
| 21 | A | A | 0.0000 | |
| 22 | L | A | 0.0000 | |
| 23 | R | A | -2.7798 | |
| 24 | R | A | -2.8756 | |
| 25 | L | A | 0.0000 | |
| 26 | L | A | 0.0000 | |
| 27 | R | A | -2.3738 | |
| 28 | F | A | -0.6364 | |
| 29 | I | A | -0.2185 | |
| 30 | A | A | -0.8797 | |
| 31 | P | A | -1.4020 | |
| 32 | D | A | -1.6405 | |
| 33 | L | A | 0.0000 | |
| 34 | V | A | 1.0874 | |
| 35 | I | A | 0.4121 | |
| 36 | T | A | 0.1341 | |
| 37 | H | A | -1.0931 | |
| 38 | M | A | -1.1917 | |
| 39 | E | A | -1.6477 | |
| 40 | A | A | -1.1326 | |
| 41 | H | A | -1.4549 | |
| 42 | V | A | -1.7130 | |
| 43 | N | A | -2.2323 | |
| 44 | E | A | -2.5273 | |
| 45 | A | A | -1.2952 | |
| 46 | T | A | -1.3487 | |
| 47 | G | A | -1.8962 | |
| 48 | R | A | -2.8654 | |
| 49 | G | A | 0.0000 | |
| 50 | K | A | -2.9427 | |
| 51 | G | A | -2.1014 | |
| 52 | C | A | -0.8420 | |
| 53 | A | A | 0.0000 | |
| 54 | W | A | -0.4381 | |
| 55 | V | A | 0.0000 | |
| 56 | I | A | -0.0295 | |
| 57 | V | A | 0.0000 | |
| 58 | P | A | 0.5925 | |
| 59 | S | A | 0.9690 | |
| 60 | V | A | 0.7913 | |
| 61 | L | A | 1.6059 | |
| 62 | E | A | 0.4713 | |
| 63 | A | A | 0.0000 | |
| 64 | K | A | -0.2833 | |
| 65 | R | A | -0.7190 | |
| 66 | L | A | 0.0000 | |
| 67 | L | A | 0.0000 | |
| 68 | R | A | -0.7807 | |
| 69 | L | A | 0.0000 | |
| 70 | S | A | 0.0000 | |
| 71 | G | A | 0.1729 | |
| 72 | R | A | 0.0000 | |
| 73 | I | A | 0.0000 | |
| 74 | F | A | 0.0000 | |
| 75 | L | A | 0.0000 | |
| 76 | D | A | 0.2158 | |
| 77 | I | A | -0.4577 | |
| 78 | N | A | -1.3560 | |
| 79 | S | A | -1.4095 | |
| 80 | N | A | -2.1820 | |
| 81 | G | A | -1.9124 | |
| 82 | E | A | -2.2554 | |
| 83 | E | A | -0.9948 | |
| 84 | V | A | -0.0747 | |
| 85 | Y | A | 0.4785 | |
| 86 | L | A | 0.5845 | |
| 87 | F | A | 0.7365 | |
| 88 | A | A | 0.0000 | |
| 89 | P | A | 0.0000 | |
| 90 | P | A | 0.0000 | |
| 91 | N | A | -1.1773 | |
| 92 | C | A | -0.6783 | |
| 93 | R | A | 0.0000 | |
| 94 | E | A | -1.9638 | |
| 95 | W | A | -0.7613 | |
| 96 | L | A | 0.0000 | |
| 97 | S | A | -1.0567 | |
| 98 | E | A | -1.8580 | |
| 99 | Y | A | -0.4192 | |
| 100 | A | A | 0.0000 | |
| 101 | D | A | -1.0418 | |
| 102 | Y | A | 0.3043 | |
| 103 | V | A | 0.4494 | |
| 104 | V | A | 0.4925 | |
| 105 | S | A | -0.0022 | |
| 106 | S | A | -0.0983 | |
| 107 | T | A | 0.0603 | |
| 108 | T | A | -0.1846 | |
| 109 | R | A | -0.0272 | |
| 110 | A | A | -0.0949 | |
| 111 | S | A | -0.6009 | |
| 112 | H | A | -1.5919 | |
| 113 | L | A | 0.0000 | |
| 114 | P | A | 0.0000 | |
| 115 | Y | A | 1.1618 | |
| 116 | L | A | 0.9785 | |
| 117 | P | A | 0.0000 | |
| 118 | M | A | 0.0000 | |
| 119 | V | A | 1.5778 | |
| 120 | V | A | 0.0000 | |
| 121 | G | A | 0.5778 | |
| 122 | V | A | -0.4240 | |
| 123 | P | A | 0.0000 | |
| 124 | K | A | -2.2975 | |
| 125 | K | A | -2.3969 | |
| 126 | E | A | -1.0461 | |
| 127 | C | A | 0.2934 | |
| 128 | I | A | 1.4352 | |
| 129 | Y | A | 1.5212 | |
| 130 | V | A | 0.0000 | |
| 131 | R | A | -0.7719 | |
| 132 | E | A | -0.9818 | |
| 133 | L | A | -0.1016 | |
| 134 | L | A | 0.0000 | |
| 135 | A | A | -0.3913 | |
| 136 | P | A | -0.4437 | |
| 137 | Y | A | -0.0099 | |
| 138 | I | A | 0.5602 | |
| 139 | Y | A | -0.0334 | |
| 140 | D | A | -1.2180 | |
| 141 | P | A | -2.0613 | |
| 142 | N | A | -2.5500 | |
| 143 | R | A | -2.9353 | |
| 144 | G | A | -2.1527 | |
| 145 | D | A | -1.8024 | |
| 146 | C | A | -0.7926 | |
| 147 | P | A | -0.7087 | |
| 148 | P | A | -0.4767 | |
| 149 | Y | A | 0.2635 | |
| 150 | A | A | -0.3197 | |
| 151 | D | A | -1.7042 | |
| 152 | A | A | 0.0000 | |
| 153 | V | A | -0.3128 | |
| 154 | S | A | -1.0305 | |
| 155 | E | A | -1.1125 | |
| 156 | F | A | -0.3314 | |
| 157 | K | A | -1.7100 | |
| 158 | G | A | -1.5211 | |
| 159 | L | A | -0.7504 | |
| 160 | L | A | -0.3190 | |
| 161 | E | A | -2.3625 | |
| 162 | D | A | -2.5901 | |
| 163 | H | A | -1.0457 | |
| 164 | A | A | -0.4820 | |
| 165 | S | A | -0.1155 | |
| 166 | L | A | 0.0000 | |
| 167 | P | A | -0.3705 | |
| 168 | V | A | -0.5476 |