Project name: AAB-PP3133

Status: done

Started: 2026-03-31 14:37:30
Settings
Chain sequence(s) H: QVQLVESGGGVVQPGESLKISCAASGFTFSSYAMHWVRQAPGKGLEWVSAISGSGGTAFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSTYYYGASGYDYYFSPWGPGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQHIRSSLAWYQQKPGKAPKLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLQPEDFATYYCQHTYITPYTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:03)
Show buried residues

Minimal score value
-3.1599
Maximal score value
2.0691
Average score
-0.5596
Total score value
-129.8185

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 Q H -1.3171
1 V H -0.6519
2 Q H -0.7387
3 L H 0.0000
4 V H 1.4211
5 E H 0.0000
6 S H -0.1185
7 G H -0.7714
8 G H 0.1410
9 G H 0.9276
10 V H 1.5562
11 V H 0.0000
12 Q H -1.7790
13 P H -1.8992
14 G H -2.0390
15 E H -2.1846
16 S H -1.5903
17 L H -0.9949
18 K H -1.9377
19 I H 0.0000
20 S H -0.3142
21 C H 0.0000
22 A H 0.0446
23 A H -0.3546
24 S H -0.5464
25 G H -0.8642
26 F H -0.3051
27 T H -0.1939
28 F H 0.0000
29 S H -0.6606
30 S H -0.0891
31 Y H 0.2538
32 A H 0.1297
33 M H 0.0000
34 H H 0.0000
35 W H 0.0000
36 V H 0.0000
37 R H 0.0000
38 Q H -0.7219
39 A H -1.0431
40 P H -0.9822
41 G H -1.5043
42 K H -2.3898
43 G H -1.6295
44 L H 0.0000
45 E H -1.2678
46 W H 0.0000
47 V H 0.0000
48 S H 0.0000
49 A H 0.0000
50 I H 0.0000
51 S H -0.2015
52 G H -0.4879
53 S H -0.7317
54 G H -0.8329
55 G H -0.7209
56 T H -0.0847
57 A H 0.6051
58 F H 1.2068
59 Y H -0.0526
60 A H -1.0505
61 D H -2.2759
62 S H -1.7122
63 V H 0.0000
64 K H -2.3433
65 G H -1.6973
66 R H -1.2503
67 F H 0.0000
68 T H -0.5923
69 I H 0.0000
70 S H -0.4560
71 R H -1.0905
72 D H -1.6526
73 N H -1.8071
74 S H -1.6309
75 K H -2.4213
76 N H -1.8642
77 T H -0.9999
78 L H 0.0000
79 Y H -0.4605
80 L H 0.0000
81 Q H -1.1220
82 M H 0.0000
83 N H -1.7072
84 S H -1.6408
85 L H 0.0000
86 R H -2.7636
87 A H -1.9131
88 E H -2.3112
89 D H 0.0000
90 T H -0.4299
91 A H 0.0000
92 V H 0.8941
93 Y H 0.0000
94 Y H 0.0000
95 C H 0.0000
96 A H 0.0000
97 R H 0.0061
98 S H 0.0000
99 T H 0.9636
100 Y H 2.0691
101 Y H 1.7545
102 Y H 1.6218
103 G H 0.3317
104 A H -0.0173
105 S H 0.0448
106 G H 0.1844
107 Y H 1.5493
108 D H 1.2265
109 Y H 1.4795
110 Y H 0.7297
111 F H 0.0000
112 S H -0.2097
113 P H -0.4865
114 W H -0.3698
115 G H 0.0000
116 P H -0.3526
117 G H 0.1878
118 T H 0.7485
119 L H 1.7363
120 V H 0.0000
121 T H 0.3735
122 V H 0.0000
123 S H -0.6648
124 S H -0.5992
125 D L -2.0085
126 I L 0.0000
127 Q L -2.1914
128 M L 0.0000
129 T L -1.2806
130 Q L 0.0000
131 S L -0.7307
132 P L -0.5971
133 S L -0.9601
134 S L -1.1304
135 L L -0.6503
136 S L -0.7030
137 A L 0.0000
138 S L -0.1482
139 V L 0.7174
140 G L -0.7083
141 D L -1.6690
142 R L -2.3430
143 V L 0.0000
144 T L -0.6349
145 I L 0.0000
146 T L -0.9700
147 C L 0.0000
148 R L -3.0417
149 A L 0.0000
150 S L -2.2538
151 Q L -2.8562
152 H L -2.5738
153 I L 0.0000
154 R L -2.6057
155 S L -1.4913
156 S L -0.4202
157 L L 0.0000
158 A L 0.0000
159 W L 0.0000
160 Y L 0.0000
161 Q L -1.0686
162 Q L -1.6989
163 K L -2.2407
164 P L -1.4935
165 G L -1.6712
166 K L -2.5856
167 A L -1.5801
168 P L 0.0000
169 K L -2.0376
170 L L -0.8143
171 L L 0.0000
172 I L 0.0000
173 Y L -0.2509
174 G L -0.8718
175 A L 0.0000
176 S L -0.8030
177 S L -0.8477
178 R L -1.6643
179 A L -0.8879
180 T L -0.5860
181 G L -0.9197
182 I L 0.0000
183 P L -1.3875
184 D L -2.3085
185 R L -1.6208
186 F L 0.0000
187 S L -1.0308
188 G L -0.5989
189 S L -0.8376
190 G L -1.4411
191 S L -1.8379
192 G L -2.4356
193 T L -2.6661
194 D L -3.1599
195 F L 0.0000
196 T L -0.9089
197 L L 0.0000
198 T L -0.6143
199 I L 0.0000
200 S L -1.6836
201 S L -1.2906
202 L L 0.0000
203 Q L -0.7795
204 P L -0.6490
205 E L -1.8867
206 D L 0.0000
207 F L -0.5784
208 A L 0.0000
209 T L -1.2819
210 Y L 0.0000
211 Y L 0.0000
212 C L 0.0000
213 Q L 0.0000
214 H L 0.0000
215 T L 1.2239
216 Y L 1.5298
217 I L 2.0402
218 T L 0.8537
219 P L -0.0319
220 Y L 0.0000
221 T L -0.4743
222 F L -0.4872
223 G L 0.0000
224 Q L -1.5932
225 G L 0.0000
226 T L 0.0000
227 K L -2.1476
228 V L 0.0000
229 E L -0.9077
230 I L 0.9388
231 K L -0.7862
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Laboratory of Theory of Biopolymers 2018