| Chain sequence(s) |
A: EVQLQASGGGLVEPGGSLRLSCAVSGINFNINHWGWYRQAPGKQREWVATIAIGGATDYADSLKGRFTISRDNMKNTVYLQMSSLRPEDTAVFYCNGVGSKWSDRWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:58)
[INFO] Main: Simulation completed successfully. (00:00:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.6460 | |
| 2 | V | A | -0.8644 | |
| 3 | Q | A | -1.3662 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.4624 | |
| 6 | A | A | -1.0845 | |
| 7 | S | A | -1.1958 | |
| 8 | G | A | -1.0050 | |
| 9 | G | A | -0.8098 | |
| 10 | G | A | -0.0307 | |
| 11 | L | A | 0.7859 | |
| 12 | V | A | 0.0000 | |
| 13 | E | A | -2.1718 | |
| 14 | P | A | -2.1886 | |
| 15 | G | A | -1.7271 | |
| 16 | G | A | -1.2032 | |
| 17 | S | A | -1.4054 | |
| 18 | L | A | -0.9697 | |
| 19 | R | A | -2.2418 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8568 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.8975 | |
| 24 | V | A | -0.7498 | |
| 25 | S | A | -0.6885 | |
| 26 | G | A | -0.3194 | |
| 27 | I | A | 0.7375 | |
| 28 | N | A | -0.5721 | |
| 29 | F | A | -0.6575 | |
| 30 | N | A | -1.4359 | |
| 31 | I | A | 0.0000 | |
| 32 | N | A | -0.5760 | |
| 33 | H | A | -0.5795 | |
| 34 | W | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | -0.4577 | |
| 38 | R | A | -1.3563 | |
| 39 | Q | A | -2.0770 | |
| 40 | A | A | -2.0115 | |
| 41 | P | A | -1.4968 | |
| 42 | G | A | -1.8116 | |
| 43 | K | A | -3.1469 | |
| 44 | Q | A | -3.0337 | |
| 45 | R | A | -2.5730 | |
| 46 | E | A | -2.4923 | |
| 47 | W | A | -0.9463 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | T | A | -0.6320 | |
| 51 | I | A | 0.0000 | |
| 52 | A | A | -0.0148 | |
| 53 | I | A | 0.5744 | |
| 54 | G | A | -0.1221 | |
| 55 | G | A | -0.5056 | |
| 56 | A | A | -0.3572 | |
| 57 | T | A | -0.7924 | |
| 58 | D | A | -1.9701 | |
| 59 | Y | A | -1.6810 | |
| 60 | A | A | -1.8237 | |
| 61 | D | A | -2.6321 | |
| 62 | S | A | -1.6786 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.8840 | |
| 65 | G | A | -1.7812 | |
| 66 | R | A | -1.4200 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -1.1943 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.6127 | |
| 71 | R | A | -0.8620 | |
| 72 | D | A | -1.2147 | |
| 73 | N | A | -1.6649 | |
| 74 | M | A | -0.6520 | |
| 75 | K | A | -1.8474 | |
| 76 | N | A | -1.8016 | |
| 77 | T | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.6821 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.6257 | |
| 82 | M | A | 0.0000 | |
| 83 | S | A | -1.2294 | |
| 84 | S | A | -1.3460 | |
| 85 | L | A | 0.0000 | |
| 86 | R | A | -3.1569 | |
| 87 | P | A | -2.4006 | |
| 88 | E | A | -2.6142 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -1.0944 | |
| 91 | A | A | 0.0000 | |
| 92 | V | A | -0.4597 | |
| 93 | F | A | 0.0000 | |
| 94 | Y | A | -0.5394 | |
| 95 | C | A | 0.0000 | |
| 96 | N | A | 0.0000 | |
| 97 | G | A | 0.0000 | |
| 98 | V | A | -0.9634 | |
| 99 | G | A | 0.0000 | |
| 100 | S | A | -1.2293 | |
| 101 | K | A | -1.4253 | |
| 102 | W | A | -0.3048 | |
| 103 | S | A | -0.9527 | |
| 104 | D | A | -1.5965 | |
| 105 | R | A | -0.9747 | |
| 106 | W | A | -0.5669 | |
| 107 | G | A | 0.0000 | |
| 108 | Q | A | -1.3963 | |
| 109 | G | A | -0.9512 | |
| 110 | T | A | -1.0720 | |
| 111 | Q | A | -1.0098 | |
| 112 | V | A | 0.0000 | |
| 113 | T | A | -0.5247 | |
| 114 | V | A | 0.0000 | |
| 115 | S | A | -1.0363 |