Project name: query_structure

Status: done

Started: 2026-03-17 01:05:14
Settings
Chain sequence(s) A: TCTLTTCPNMGNMGNMGNMG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:05)
Show buried residues

Minimal score value
-1.5082
Maximal score value
1.7138
Average score
-0.1651
Total score value
-3.3027

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 T A 0.5460
2 C A 1.0491
3 T A 1.0806
4 L A 1.7138
5 T A 0.8038
6 T A 0.5391
7 C A 0.5979
8 P A -0.4817
9 N A -1.2290
10 M A -0.1740
11 G A -1.2644
12 N A -1.5082
13 M A -0.3045
14 G A -1.1537
15 N A -1.3611
16 M A 0.0672
17 G A -0.7567
18 N A -1.1656
19 M A 0.1603
20 G A -0.4616
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Laboratory of Theory of Biopolymers 2018