Project name: query_structure

Status: done

Started: 2026-03-17 00:11:28
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Chain sequence(s) A: MGVSDVPRDLEVVAATPTSLLISWSRPKGSIKYYRITYGETGGNSPVQEFTVPRTDHTATISGLKPGVDYTITVYAVKGQYYQEPHYYPISINYRTEIDKPS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:22)
Show buried residues

Minimal score value
-3.4262
Maximal score value
1.5244
Average score
-0.8657
Total score value
-88.2982

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.0669
2 G A 0.3827
3 V A 0.5144
4 S A -0.2757
5 D A -0.9874
6 V A -0.6526
7 P A 0.0000
8 R A -3.4262
9 D A -3.3518
10 L A 0.0000
11 E A -1.9968
12 V A 0.0665
13 V A 1.5244
14 A A 0.8828
15 A A 0.0316
16 T A -0.9191
17 P A -1.8395
18 T A -1.1964
19 S A -0.6466
20 L A 0.0000
21 L A 0.7380
22 I A 0.0000
23 S A -1.0234
24 W A 0.0000
25 S A -2.7858
26 R A -3.4164
27 P A 0.0000
28 K A -2.3979
29 G A -1.7422
30 S A -1.8299
31 I A 0.0000
32 K A -2.4417
33 Y A -1.4044
34 Y A 0.0000
35 R A -0.7658
36 I A 0.0000
37 T A 0.0000
38 Y A -0.2820
39 G A 0.0000
40 E A -1.5193
41 T A -1.2225
42 G A -1.2230
43 G A -1.3984
44 N A -1.5421
45 S A -0.8338
46 P A -0.2976
47 V A 0.4789
48 Q A -0.7713
49 E A -1.5926
50 F A -0.6379
51 T A -0.5302
52 V A 0.0000
53 P A -1.5220
54 R A -2.6919
55 T A -1.6865
56 D A -1.6509
57 H A -1.6006
58 T A -0.5549
59 A A 0.0000
60 T A 0.2418
61 I A 0.0000
62 S A -0.6370
63 G A -0.9882
64 L A 0.0000
65 K A -2.4232
66 P A -2.0025
67 G A -1.4944
68 V A -1.2069
69 D A -2.1155
70 Y A 0.0000
71 T A -0.7659
72 I A 0.0000
73 T A -0.1789
74 V A 0.0000
75 Y A 0.3304
76 A A 0.0000
77 V A 0.0000
78 K A -1.7041
79 G A -1.5758
80 Q A -1.4437
81 Y A 0.7162
82 Y A 0.5448
83 Q A -1.7260
84 E A -2.3906
85 P A -1.7091
86 H A -1.3064
87 Y A 0.2943
88 Y A 0.4993
89 P A 0.2364
90 I A -0.0730
91 S A -0.3647
92 I A -0.7328
93 N A -1.7161
94 Y A -1.5860
95 R A -2.5101
96 T A 0.0000
97 E A -2.2611
98 I A -1.3581
99 D A -2.7584
100 K A -2.6078
101 P A -1.4977
102 S A -1.0565
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Laboratory of Theory of Biopolymers 2018