| Chain sequence(s) |
A: MGVSDVPRDLEVVAATPTSLLISWSRPKGSIKYYRITYGETGGNSPVQEFTVPRTDHTATISGLKPGVDYTITVYAVKGQYYQEPHYYPISINYRTEIDKPS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:22)
[INFO] Main: Simulation completed successfully. (00:01:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0669 | |
| 2 | G | A | 0.3827 | |
| 3 | V | A | 0.5144 | |
| 4 | S | A | -0.2757 | |
| 5 | D | A | -0.9874 | |
| 6 | V | A | -0.6526 | |
| 7 | P | A | 0.0000 | |
| 8 | R | A | -3.4262 | |
| 9 | D | A | -3.3518 | |
| 10 | L | A | 0.0000 | |
| 11 | E | A | -1.9968 | |
| 12 | V | A | 0.0665 | |
| 13 | V | A | 1.5244 | |
| 14 | A | A | 0.8828 | |
| 15 | A | A | 0.0316 | |
| 16 | T | A | -0.9191 | |
| 17 | P | A | -1.8395 | |
| 18 | T | A | -1.1964 | |
| 19 | S | A | -0.6466 | |
| 20 | L | A | 0.0000 | |
| 21 | L | A | 0.7380 | |
| 22 | I | A | 0.0000 | |
| 23 | S | A | -1.0234 | |
| 24 | W | A | 0.0000 | |
| 25 | S | A | -2.7858 | |
| 26 | R | A | -3.4164 | |
| 27 | P | A | 0.0000 | |
| 28 | K | A | -2.3979 | |
| 29 | G | A | -1.7422 | |
| 30 | S | A | -1.8299 | |
| 31 | I | A | 0.0000 | |
| 32 | K | A | -2.4417 | |
| 33 | Y | A | -1.4044 | |
| 34 | Y | A | 0.0000 | |
| 35 | R | A | -0.7658 | |
| 36 | I | A | 0.0000 | |
| 37 | T | A | 0.0000 | |
| 38 | Y | A | -0.2820 | |
| 39 | G | A | 0.0000 | |
| 40 | E | A | -1.5193 | |
| 41 | T | A | -1.2225 | |
| 42 | G | A | -1.2230 | |
| 43 | G | A | -1.3984 | |
| 44 | N | A | -1.5421 | |
| 45 | S | A | -0.8338 | |
| 46 | P | A | -0.2976 | |
| 47 | V | A | 0.4789 | |
| 48 | Q | A | -0.7713 | |
| 49 | E | A | -1.5926 | |
| 50 | F | A | -0.6379 | |
| 51 | T | A | -0.5302 | |
| 52 | V | A | 0.0000 | |
| 53 | P | A | -1.5220 | |
| 54 | R | A | -2.6919 | |
| 55 | T | A | -1.6865 | |
| 56 | D | A | -1.6509 | |
| 57 | H | A | -1.6006 | |
| 58 | T | A | -0.5549 | |
| 59 | A | A | 0.0000 | |
| 60 | T | A | 0.2418 | |
| 61 | I | A | 0.0000 | |
| 62 | S | A | -0.6370 | |
| 63 | G | A | -0.9882 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -2.4232 | |
| 66 | P | A | -2.0025 | |
| 67 | G | A | -1.4944 | |
| 68 | V | A | -1.2069 | |
| 69 | D | A | -2.1155 | |
| 70 | Y | A | 0.0000 | |
| 71 | T | A | -0.7659 | |
| 72 | I | A | 0.0000 | |
| 73 | T | A | -0.1789 | |
| 74 | V | A | 0.0000 | |
| 75 | Y | A | 0.3304 | |
| 76 | A | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | K | A | -1.7041 | |
| 79 | G | A | -1.5758 | |
| 80 | Q | A | -1.4437 | |
| 81 | Y | A | 0.7162 | |
| 82 | Y | A | 0.5448 | |
| 83 | Q | A | -1.7260 | |
| 84 | E | A | -2.3906 | |
| 85 | P | A | -1.7091 | |
| 86 | H | A | -1.3064 | |
| 87 | Y | A | 0.2943 | |
| 88 | Y | A | 0.4993 | |
| 89 | P | A | 0.2364 | |
| 90 | I | A | -0.0730 | |
| 91 | S | A | -0.3647 | |
| 92 | I | A | -0.7328 | |
| 93 | N | A | -1.7161 | |
| 94 | Y | A | -1.5860 | |
| 95 | R | A | -2.5101 | |
| 96 | T | A | 0.0000 | |
| 97 | E | A | -2.2611 | |
| 98 | I | A | -1.3581 | |
| 99 | D | A | -2.7584 | |
| 100 | K | A | -2.6078 | |
| 101 | P | A | -1.4977 | |
| 102 | S | A | -1.0565 |