| Chain sequence(s) |
A: KFFRKIWRWIRKRWW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:56)
[INFO] Main: Simulation completed successfully. (00:00:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -0.8010 | |
| 2 | F | A | 1.1591 | |
| 3 | F | A | 1.1435 | |
| 4 | R | A | -1.3702 | |
| 5 | K | A | -1.3573 | |
| 6 | I | A | 0.2939 | |
| 7 | W | A | -0.3934 | |
| 8 | R | A | -2.3362 | |
| 9 | W | A | -1.1116 | |
| 10 | I | A | -1.0177 | |
| 11 | R | A | -1.6056 | |
| 12 | K | A | -2.4909 | |
| 13 | R | A | -2.1064 | |
| 14 | W | A | 0.0031 | |
| 15 | W | A | 0.2753 |