Project name: 1E11

Status: done

Started: 2025-08-08 05:00:51
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Chain sequence(s) H: QVQLVESGGGLVQAGDSLRLSCAASGRTFSTYAVGWFRQAPGKEREFVAAINWNGDMTHYADSVKGRFTISRDSAKNTVYLQMNSLKPEDTAVYYCAAESRGSTGWGTTHYEYDYWGQGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:57)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:58)
Show buried residues

Minimal score value
-3.1921
Maximal score value
1.1494
Average score
-0.7389
Total score value
-93.0981

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.6483
2 V H -1.4673
3 Q H -1.1359
4 L H 0.0000
5 V H 1.1494
6 E H 0.0000
7 S H -0.3852
8 G H -0.8331
9 G H -0.4958
11 G H 0.1295
12 L H 1.1458
13 V H -0.1470
14 Q H -1.4813
15 A H -1.8257
16 G H -1.7204
17 D H -1.9010
18 S H -1.3444
19 L H -0.7798
20 R H -1.2058
21 L H 0.0000
22 S H -0.1410
23 C H 0.0000
24 A H 0.0219
25 A H -0.5931
26 S H -1.1580
27 G H -1.7287
28 R H -2.3485
29 T H -1.2069
30 F H 0.0000
35 S H -0.8439
36 T H -0.5894
37 Y H -0.1810
38 A H -0.0772
39 V H 0.0000
40 G H 0.0000
41 W H 0.0000
42 F H 0.0000
43 R H 0.0000
44 Q H -1.6517
45 A H -1.6860
46 P H -1.3317
47 G H -1.8886
48 K H -3.1446
49 E H -3.1921
50 R H -1.9951
51 E H -1.4348
52 F H -0.6029
53 V H 0.0000
54 A H 0.0000
55 A H 0.0000
56 I H 0.0000
57 N H -0.2872
58 W H -0.2088
59 N H -1.4912
62 G H -1.2876
63 D H -1.6444
64 M H 0.0189
65 T H 0.0216
66 H H -0.2503
67 Y H -0.9528
68 A H -1.4194
69 D H -2.5552
70 S H -1.7884
71 V H 0.0000
72 K H -2.6939
74 G H -1.7630
75 R H -1.4992
76 F H 0.0000
77 T H -0.7283
78 I H 0.0000
79 S H -0.5670
80 R H -1.1066
81 D H -1.4262
82 S H -1.4217
83 A H -1.2721
84 K H -2.1403
85 N H 0.0000
86 T H 0.0000
87 V H 0.0000
88 Y H -0.3410
89 L H 0.0000
90 Q H -0.7651
91 M H 0.0000
92 N H -1.4171
93 S H -1.4300
94 L H 0.0000
95 K H -2.3522
96 P H -1.8213
97 E H -2.2958
98 D H 0.0000
99 T H -0.7934
100 A H 0.0000
101 V H -0.2098
102 Y H 0.0000
103 Y H 0.0294
104 C H 0.0000
105 A H 0.0000
106 A H 0.0000
107 E H 0.0000
108 S H -1.5465
109 R H -2.0809
110 G H -1.1828
111 S H -0.9018
111A T H -0.5163
111B G H -0.3778
111C W H 0.1926
112C G H -0.1175
112B T H -0.1061
112A T H -0.1076
112 H H -0.5560
113 Y H 0.3001
114 E H -1.0677
115 Y H 0.0000
116 D H -1.9985
117 Y H -0.9525
118 W H -0.3163
119 G H -0.1142
120 Q H -0.8072
121 G H -0.3552
122 T H -0.4535
123 Q H -0.6256
124 V H 0.0000
125 T H -0.1809
126 V H 0.0000
127 S H -0.8370
128 S H -0.8099
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Laboratory of Theory of Biopolymers 2018