| Chain sequence(s) |
B: ELRALMDKFMKALKVLKEIADLVFEQNPSKELKEEIEKKEKELEEKIKKL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:51)
[INFO] Main: Simulation completed successfully. (00:02:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | B | -1.7916 | |
| 2 | L | B | -0.5451 | |
| 3 | R | B | -2.0224 | |
| 4 | A | B | -1.6405 | |
| 5 | L | B | -0.7839 | |
| 6 | M | B | -1.6222 | |
| 7 | D | B | -2.8912 | |
| 8 | K | B | -2.5621 | |
| 9 | F | B | -1.0897 | |
| 10 | M | B | -1.6574 | |
| 11 | K | B | -2.5724 | |
| 12 | A | B | -1.4047 | |
| 13 | L | B | 0.0000 | |
| 14 | K | B | -2.1479 | |
| 15 | V | B | -0.6383 | |
| 16 | L | B | -0.3708 | |
| 17 | K | B | -1.6358 | |
| 18 | E | B | -1.3575 | |
| 19 | I | B | 0.7683 | |
| 20 | A | B | 0.0000 | |
| 21 | D | B | -1.6678 | |
| 22 | L | B | 0.0598 | |
| 23 | V | B | -0.1420 | |
| 24 | F | B | -1.4692 | |
| 25 | E | B | -2.2620 | |
| 26 | Q | B | -2.2326 | |
| 27 | N | B | -2.3793 | |
| 28 | P | B | -2.2275 | |
| 29 | S | B | -2.6225 | |
| 30 | K | B | -3.4639 | |
| 31 | E | B | -3.7476 | |
| 32 | L | B | -2.8698 | |
| 33 | K | B | -3.9165 | |
| 34 | E | B | -4.3922 | |
| 35 | E | B | -4.5912 | |
| 36 | I | B | -3.6830 | |
| 37 | E | B | -4.1885 | |
| 38 | K | B | -4.8028 | |
| 39 | K | B | -4.3602 | |
| 40 | E | B | -4.0478 | |
| 41 | K | B | -4.8037 | |
| 42 | E | B | -4.8258 | |
| 43 | L | B | -3.3051 | |
| 44 | E | B | -4.0650 | |
| 45 | E | B | -4.8153 | |
| 46 | K | B | -3.9638 | |
| 47 | I | B | 0.0000 | |
| 48 | K | B | -3.3915 | |
| 49 | K | B | -2.9749 | |
| 50 | L | B | -0.5223 |