| Chain sequence(s) |
A: MSHHHHHHSGSRDEANEAAYKFMLFFMEMYRLSYKYGIKEEYEKFEKTLRKKDVTYEEALEAMDKLFEVLKKVLPEEELKEFEKLYKEGKEALKIIGDYYEPKGADRFADIMYQVADGWWYIFYPEKKDNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:26)
[INFO] Main: Simulation completed successfully. (00:07:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5368 | |
| 2 | S | A | -0.6280 | |
| 3 | H | A | -1.7711 | |
| 4 | H | A | -2.3686 | |
| 5 | H | A | -2.8028 | |
| 6 | H | A | -2.7982 | |
| 7 | H | A | -2.7230 | |
| 8 | H | A | -2.2191 | |
| 9 | S | A | -1.9458 | |
| 10 | G | A | -2.0468 | |
| 11 | S | A | -2.7205 | |
| 12 | R | A | -3.9097 | |
| 13 | D | A | -4.4616 | |
| 14 | E | A | -4.1533 | |
| 15 | A | A | 0.0000 | |
| 16 | N | A | -3.3422 | |
| 17 | E | A | -3.4119 | |
| 18 | A | A | 0.0000 | |
| 19 | A | A | -0.9280 | |
| 20 | Y | A | 0.0825 | |
| 21 | K | A | -1.2893 | |
| 22 | F | A | 0.0000 | |
| 23 | M | A | 0.1860 | |
| 24 | L | A | 0.6941 | |
| 25 | F | A | 0.0000 | |
| 26 | F | A | 0.0000 | |
| 27 | M | A | 0.0842 | |
| 28 | E | A | -0.2763 | |
| 29 | M | A | 0.0000 | |
| 30 | Y | A | -0.6728 | |
| 31 | R | A | -1.3758 | |
| 32 | L | A | 0.0000 | |
| 33 | S | A | 0.0000 | |
| 34 | Y | A | -1.3395 | |
| 35 | K | A | -1.7954 | |
| 36 | Y | A | -0.5521 | |
| 37 | G | A | -1.0641 | |
| 38 | I | A | -1.2017 | |
| 39 | K | A | -2.5588 | |
| 40 | E | A | -3.2360 | |
| 41 | E | A | -2.8148 | |
| 42 | Y | A | 0.0000 | |
| 43 | E | A | -3.1706 | |
| 44 | K | A | -3.7028 | |
| 45 | F | A | 0.0000 | |
| 46 | E | A | -2.2259 | |
| 47 | K | A | -2.8869 | |
| 48 | T | A | -2.5044 | |
| 49 | L | A | 0.0000 | |
| 50 | R | A | -2.2696 | |
| 51 | K | A | -3.2469 | |
| 52 | K | A | -3.6488 | |
| 53 | D | A | -3.6279 | |
| 54 | V | A | 0.0000 | |
| 55 | T | A | -2.0108 | |
| 56 | Y | A | -1.6941 | |
| 57 | E | A | -2.5362 | |
| 58 | E | A | -2.4231 | |
| 59 | A | A | 0.0000 | |
| 60 | L | A | -2.1048 | |
| 61 | E | A | -3.2159 | |
| 62 | A | A | -2.7480 | |
| 63 | M | A | 0.0000 | |
| 64 | D | A | -3.1479 | |
| 65 | K | A | -3.5482 | |
| 66 | L | A | 0.0000 | |
| 67 | F | A | 0.0000 | |
| 68 | E | A | -3.2359 | |
| 69 | V | A | -1.9451 | |
| 70 | L | A | 0.0000 | |
| 71 | K | A | -2.7822 | |
| 72 | K | A | -2.3833 | |
| 73 | V | A | -0.7567 | |
| 74 | L | A | 0.0000 | |
| 75 | P | A | -2.1011 | |
| 76 | E | A | -3.7883 | |
| 77 | E | A | -3.9661 | |
| 78 | E | A | -3.4062 | |
| 79 | L | A | -3.5268 | |
| 80 | K | A | -4.4614 | |
| 81 | E | A | -4.1413 | |
| 82 | F | A | 0.0000 | |
| 83 | E | A | -3.3389 | |
| 84 | K | A | -3.7526 | |
| 85 | L | A | -2.7787 | |
| 86 | Y | A | 0.0000 | |
| 87 | K | A | -3.6451 | |
| 88 | E | A | -4.0401 | |
| 89 | G | A | 0.0000 | |
| 90 | K | A | -2.8157 | |
| 91 | E | A | -3.3714 | |
| 92 | A | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | K | A | -2.0731 | |
| 95 | I | A | -1.3647 | |
| 96 | I | A | 0.0000 | |
| 97 | G | A | 0.0000 | |
| 98 | D | A | -1.7516 | |
| 99 | Y | A | -1.9713 | |
| 100 | Y | A | 0.0000 | |
| 101 | E | A | -1.8895 | |
| 102 | P | A | -1.7250 | |
| 103 | K | A | -2.2282 | |
| 104 | G | A | -1.6526 | |
| 105 | A | A | -2.0047 | |
| 106 | D | A | -3.1015 | |
| 107 | R | A | -2.9567 | |
| 108 | F | A | 0.0000 | |
| 109 | A | A | 0.0000 | |
| 110 | D | A | -2.8556 | |
| 111 | I | A | -1.2316 | |
| 112 | M | A | 0.0000 | |
| 113 | Y | A | -1.0502 | |
| 114 | Q | A | -1.0113 | |
| 115 | V | A | 0.0000 | |
| 116 | A | A | 0.0000 | |
| 117 | D | A | 0.0776 | |
| 118 | G | A | 1.1035 | |
| 119 | W | A | 0.0000 | |
| 120 | W | A | 1.4559 | |
| 121 | Y | A | 2.1205 | |
| 122 | I | A | 3.4142 | |
| 123 | F | A | 2.9757 | |
| 124 | Y | A | 1.1021 | |
| 125 | P | A | -0.2790 | |
| 126 | E | A | -2.9461 | |
| 127 | K | A | -3.4877 | |
| 128 | K | A | -3.6259 | |
| 129 | D | A | -4.1136 | |
| 130 | N | A | -3.4903 | |
| 131 | S | A | -2.2584 |