Project name: 87a030b232622e0

Status: done

Started: 2026-03-12 15:26:09
Settings
Chain sequence(s) A: AETVESCLAKPHTEVSFTNVWKEGDSRYANYEGCLWSAGGVVVCTGDETQCYGHWVPIGLAIPENEGGGSEGGGSEGGGSEGGGTKPPEYGDTPIPGTTWINPLDGTYPPGTEQNPANPNPSLEESQPLNTFMVQGNRFRNRQGALTVYTGMFTQGTDPVKRYYLYTPLSSRAMYDAYWNGKFRDCAFHSGFNEDPFVCEYQGQSSDLPQPPANA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:06)
Show buried residues

Minimal score value
-3.3607
Maximal score value
2.3846
Average score
-0.9493
Total score value
-204.0951

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -1.6404
2 E A -2.3397
3 T A -1.7048
4 V A 0.0000
5 E A -2.3051
6 S A -1.4606
7 C A 0.0000
8 L A 0.0000
9 A A -1.2687
10 K A -1.1537
11 P A -0.9861
12 H A -1.4387
13 T A -1.3313
14 E A -1.7313
15 V A -0.2510
16 S A 0.2422
17 F A 0.0000
18 T A -0.8721
19 N A -1.7686
20 V A 0.0000
21 W A 0.0000
22 K A -2.6186
23 E A -2.2091
24 G A -1.9892
25 D A -2.3913
26 S A -1.7280
27 R A -1.5862
28 Y A 0.0000
29 A A 0.0000
30 N A -0.7109
31 Y A -0.2203
32 E A -1.7030
33 G A -1.2633
34 C A 0.0000
35 L A 0.0000
36 W A 0.0000
37 S A 0.0000
38 A A -0.4462
39 G A -0.5042
40 G A 0.1963
41 V A 2.1651
42 V A 2.1124
43 V A 2.3846
44 C A 0.5226
45 T A -0.8305
46 G A -1.4975
47 D A -2.7669
48 E A -2.4881
49 T A -2.3456
50 Q A -1.4235
51 C A 0.0000
52 Y A 1.2595
53 G A 0.0000
54 H A -0.9182
55 W A 0.0000
56 V A 0.0000
57 P A 0.0000
58 I A 0.0000
59 G A 0.0000
60 L A -0.5204
61 A A -0.6182
62 I A 0.0000
63 P A -2.0985
64 E A -3.1976
65 N A -3.1621
66 E A -3.3607
67 G A -2.4703
68 G A -2.5682
69 G A -1.9465
70 S A 0.0000
71 E A -2.6005
72 G A -2.0563
73 G A -1.8235
74 G A -2.1307
75 S A -1.6545
76 E A -2.7914
77 G A -2.4987
78 G A -2.6814
79 G A -2.6643
80 S A -2.2754
81 E A -2.4510
82 G A -1.7611
83 G A -2.1596
84 G A -2.4488
85 T A -2.3725
86 K A -2.8842
87 P A -1.7184
88 P A -1.6061
89 E A -2.3242
90 Y A -0.9956
91 G A -1.5419
92 D A -1.9142
93 T A -0.7394
94 P A 0.0000
95 I A 0.0000
96 P A -0.1162
97 G A 0.0000
98 T A -0.1269
99 T A 0.0513
100 W A 0.0000
101 I A 0.0000
102 N A 0.0000
103 P A -0.1121
104 L A -0.2401
105 D A -1.8607
106 G A -1.4263
107 T A -1.4183
108 Y A 0.0000
109 P A 0.0000
110 P A -1.6765
111 G A 0.0000
112 T A 0.0000
113 E A -2.7222
114 Q A -2.2303
115 N A 0.0000
116 P A -1.2491
117 A A -0.9157
118 N A -1.1568
119 P A -1.2212
120 N A -1.6140
121 P A -0.6700
122 S A -0.4496
123 L A 0.1336
124 E A -1.2537
125 E A -2.3429
126 S A -1.4497
127 Q A -1.2556
128 P A -0.2973
129 L A 0.1635
130 N A 0.0513
131 T A 0.0000
132 F A 0.0000
133 M A 0.0626
134 V A 0.0000
135 Q A -1.5717
136 G A -0.7343
137 N A -0.6560
138 R A -0.4086
139 F A 0.0000
140 R A 0.0000
141 N A 0.0000
142 R A -0.6642
143 Q A -0.3779
144 G A 0.0000
145 A A -0.3063
146 L A 0.0000
147 T A 0.0000
148 V A 0.0000
149 Y A 0.1623
150 T A 0.0000
151 G A 0.5378
152 M A 1.0786
153 F A 0.7364
154 T A -0.5182
155 Q A -1.5684
156 G A -1.3790
157 T A -1.0325
158 D A -1.7473
159 P A -0.9968
160 V A -0.3034
161 K A -1.6510
162 R A -1.7669
163 Y A -0.9544
164 Y A 0.0798
165 L A 0.6710
166 Y A 0.0000
167 T A -0.2913
168 P A -0.6259
169 L A 0.0000
170 S A -1.4341
171 S A -1.7130
172 R A -2.4546
173 A A -1.4263
174 M A 0.0000
175 Y A 0.0000
176 D A -1.6059
177 A A 0.0000
178 Y A 0.0000
179 W A 0.0000
180 N A -1.8519
181 G A -1.5958
182 K A -2.3823
183 F A -2.2369
184 R A -3.0948
185 D A -2.1110
186 C A -0.7060
187 A A -0.0135
188 F A 0.6537
189 H A -0.2671
190 S A -0.5006
191 G A -0.3984
192 F A 0.1512
193 N A -2.1616
194 E A -3.0079
195 D A -2.4999
196 P A 0.0000
197 F A -0.0240
198 V A 0.4691
199 C A 0.0000
200 E A -2.8252
201 Y A -2.4963
202 Q A -2.4596
203 G A -2.0436
204 Q A -2.3046
205 S A -2.1093
206 S A -1.8913
207 D A -2.5782
208 L A 0.0000
209 P A -1.4772
210 Q A -1.6178
211 P A 0.0000
212 P A -0.7595
213 A A -0.7825
214 N A -1.2487
215 A A -0.6124
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018