| Chain sequence(s) |
A: AANPYQRGPAPTAASVAAVTGPFATASVSVPRGNGFGGGVIYYPTDTSQGTFGGLAISPGLNGTWPGIAWLGSRLASQGFIVFGIETNNLNDSPTSRGTQLLAALDYLAQRSSVRSRLDPGRLAVAGHSMGGGGALDAALRRPSLKAAIGNAPYLPSNTLAGNRVPTLIYAMQNDTLVPPSRLTSLYNTIPATTERAYLEITGAGHNYIGQPSTTLARTMIPWLKIFIDNDTRFSQFLCPLADQSGIRQYRSSCPLVPATTRALTAAAG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:08)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17)
[INFO] Main: Simulation completed successfully. (00:01:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.0224 | |
| 2 | A | A | -0.1545 | |
| 3 | N | A | -0.4576 | |
| 4 | P | A | -0.4864 | |
| 5 | Y | A | -0.3081 | |
| 6 | Q | A | -0.7902 | |
| 7 | R | A | 0.0000 | |
| 8 | G | A | -0.4663 | |
| 9 | P | A | -0.4689 | |
| 10 | A | A | -0.2883 | |
| 11 | P | A | -0.3443 | |
| 12 | T | A | -0.2622 | |
| 13 | A | A | -0.2724 | |
| 14 | A | A | 0.1878 | |
| 15 | S | A | 0.0880 | |
| 16 | V | A | 0.0000 | |
| 17 | A | A | 0.3415 | |
| 18 | A | A | 0.7717 | |
| 19 | V | A | 1.6677 | |
| 20 | T | A | 0.6881 | |
| 21 | G | A | 0.1453 | |
| 22 | P | A | -0.3542 | |
| 23 | F | A | 0.0000 | |
| 24 | A | A | -0.1729 | |
| 25 | T | A | -0.1285 | |
| 26 | A | A | 0.1087 | |
| 27 | S | A | 0.2095 | |
| 28 | V | A | 0.4470 | |
| 29 | S | A | -0.0905 | |
| 30 | V | A | 0.0000 | |
| 31 | P | A | -1.3837 | |
| 32 | R | A | -2.5758 | |
| 33 | G | A | -1.9707 | |
| 34 | N | A | -2.2089 | |
| 35 | G | A | -1.5632 | |
| 36 | F | A | 0.0000 | |
| 37 | G | A | -1.7113 | |
| 38 | G | A | 0.0000 | |
| 39 | G | A | -0.4197 | |
| 40 | V | A | 0.3201 | |
| 41 | I | A | 0.0000 | |
| 42 | Y | A | 0.3022 | |
| 43 | Y | A | 0.1061 | |
| 44 | P | A | 0.0000 | |
| 45 | T | A | -0.4327 | |
| 46 | D | A | -1.0320 | |
| 47 | T | A | -0.9315 | |
| 48 | S | A | -0.8692 | |
| 49 | Q | A | -1.1391 | |
| 50 | G | A | -0.9570 | |
| 51 | T | A | -0.8518 | |
| 52 | F | A | 0.0000 | |
| 53 | G | A | 0.0000 | |
| 54 | G | A | 0.0000 | |
| 55 | L | A | 0.0000 | |
| 56 | A | A | 0.0000 | |
| 57 | I | A | 0.0000 | |
| 58 | S | A | 0.0000 | |
| 59 | P | A | 0.0000 | |
| 60 | G | A | 0.0000 | |
| 61 | L | A | -0.0825 | |
| 62 | N | A | -1.1218 | |
| 63 | G | A | -0.7901 | |
| 64 | T | A | -0.5517 | |
| 65 | W | A | 0.0000 | |
| 66 | P | A | -0.5126 | |
| 67 | G | A | -1.0047 | |
| 68 | I | A | 0.0000 | |
| 69 | A | A | -0.3574 | |
| 70 | W | A | -0.1499 | |
| 71 | L | A | 0.0000 | |
| 72 | G | A | 0.0000 | |
| 73 | S | A | 0.1780 | |
| 74 | R | A | 0.0000 | |
| 75 | L | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | S | A | 0.0000 | |
| 78 | Q | A | 0.0000 | |
| 79 | G | A | 0.0000 | |
| 80 | F | A | 0.0000 | |
| 81 | I | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | F | A | 0.0000 | |
| 84 | G | A | 0.0000 | |
| 85 | I | A | 0.0000 | |
| 86 | E | A | -0.9082 | |
| 87 | T | A | 0.0000 | |
| 88 | N | A | -1.5761 | |
| 89 | N | A | -1.6665 | |
| 90 | L | A | -0.8588 | |
| 91 | N | A | -1.4439 | |
| 92 | D | A | 0.0000 | |
| 93 | S | A | -0.3195 | |
| 94 | P | A | 0.0000 | |
| 95 | T | A | -0.2005 | |
| 96 | S | A | -0.5380 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | 0.0000 | |
| 99 | T | A | -0.3959 | |
| 100 | Q | A | 0.0000 | |
| 101 | L | A | 0.0000 | |
| 102 | L | A | 0.0000 | |
| 103 | A | A | -0.6056 | |
| 104 | A | A | 0.0000 | |
| 105 | L | A | 0.0000 | |
| 106 | D | A | -1.5388 | |
| 107 | Y | A | -1.6862 | |
| 108 | L | A | 0.0000 | |
| 109 | A | A | -1.9806 | |
| 110 | Q | A | -2.5867 | |
| 111 | R | A | -2.8324 | |
| 112 | S | A | 0.0000 | |
| 113 | S | A | -1.1899 | |
| 114 | V | A | 0.0000 | |
| 115 | R | A | -2.6357 | |
| 116 | S | A | -1.6354 | |
| 117 | R | A | -1.2936 | |
| 118 | L | A | 0.0000 | |
| 119 | D | A | -0.8902 | |
| 120 | P | A | -1.1477 | |
| 121 | G | A | -0.7404 | |
| 122 | R | A | 0.0000 | |
| 123 | L | A | 0.0000 | |
| 124 | A | A | 0.0000 | |
| 125 | V | A | 0.0000 | |
| 126 | A | A | 0.0000 | |
| 127 | G | A | 0.0000 | |
| 128 | H | A | 0.0000 | |
| 129 | S | A | 0.0000 | |
| 130 | M | A | 0.1656 | |
| 131 | G | A | 0.0000 | |
| 132 | G | A | 0.0000 | |
| 133 | G | A | 0.0000 | |
| 134 | G | A | 0.0000 | |
| 135 | A | A | 0.0000 | |
| 136 | L | A | 0.0000 | |
| 137 | D | A | -0.5457 | |
| 138 | A | A | 0.0000 | |
| 139 | A | A | 0.0000 | |
| 140 | L | A | -0.9726 | |
| 141 | R | A | -1.8622 | |
| 142 | R | A | -1.4817 | |
| 143 | P | A | -1.3692 | |
| 144 | S | A | -1.0129 | |
| 145 | L | A | 0.0000 | |
| 146 | K | A | -0.8720 | |
| 147 | A | A | 0.0000 | |
| 148 | A | A | 0.0000 | |
| 149 | I | A | 0.0000 | |
| 150 | G | A | 0.0000 | |
| 151 | N | A | 0.0000 | |
| 152 | A | A | 0.0000 | |
| 153 | P | A | 0.0000 | |
| 154 | Y | A | 0.5138 | |
| 155 | L | A | 0.0000 | |
| 156 | P | A | -0.3171 | |
| 157 | S | A | -0.4262 | |
| 158 | N | A | -0.4999 | |
| 159 | T | A | -0.5333 | |
| 160 | L | A | 0.0000 | |
| 161 | A | A | -0.5589 | |
| 162 | G | A | -1.0148 | |
| 163 | N | A | 0.0000 | |
| 164 | R | A | -2.2741 | |
| 165 | V | A | 0.0000 | |
| 166 | P | A | 0.0000 | |
| 167 | T | A | 0.0000 | |
| 168 | L | A | 0.0000 | |
| 169 | I | A | 0.0000 | |
| 170 | Y | A | 0.0000 | |
| 171 | A | A | 0.0000 | |
| 172 | M | A | 0.0000 | |
| 173 | Q | A | -1.6567 | |
| 174 | N | A | -1.5498 | |
| 175 | D | A | 0.0000 | |
| 176 | T | A | 0.1916 | |
| 177 | L | A | 1.1305 | |
| 178 | V | A | 0.0000 | |
| 179 | P | A | -0.2785 | |
| 180 | P | A | -0.5311 | |
| 181 | S | A | -0.6143 | |
| 182 | R | A | -0.5823 | |
| 183 | L | A | 0.0000 | |
| 184 | T | A | -0.8034 | |
| 185 | S | A | -0.8954 | |
| 186 | L | A | 0.0000 | |
| 187 | Y | A | 0.0000 | |
| 188 | N | A | -1.3719 | |
| 189 | T | A | -0.7765 | |
| 190 | I | A | 0.0000 | |
| 191 | P | A | -0.7762 | |
| 192 | A | A | -0.4495 | |
| 193 | T | A | -0.5206 | |
| 194 | T | A | 0.0000 | |
| 195 | E | A | -0.5637 | |
| 196 | R | A | -0.8709 | |
| 197 | A | A | 0.0000 | |
| 198 | Y | A | 0.0000 | |
| 199 | L | A | 0.0000 | |
| 200 | E | A | 0.0000 | |
| 201 | I | A | 0.0000 | |
| 202 | T | A | -1.3828 | |
| 203 | G | A | -1.2882 | |
| 204 | A | A | 0.0000 | |
| 205 | G | A | -1.1019 | |
| 206 | H | A | -0.8227 | |
| 207 | N | A | -1.4866 | |
| 208 | Y | A | -1.1482 | |
| 209 | I | A | 0.0000 | |
| 210 | G | A | -1.5270 | |
| 211 | Q | A | -1.6961 | |
| 212 | P | A | -0.6187 | |
| 213 | S | A | 0.0000 | |
| 214 | T | A | -0.0029 | |
| 215 | T | A | -0.4731 | |
| 216 | L | A | 0.0000 | |
| 217 | A | A | 0.0000 | |
| 218 | R | A | -0.1591 | |
| 219 | T | A | 0.0000 | |
| 220 | M | A | 0.0000 | |
| 221 | I | A | 0.0000 | |
| 222 | P | A | 0.0000 | |
| 223 | W | A | 0.0000 | |
| 224 | L | A | 0.0000 | |
| 225 | K | A | 0.0000 | |
| 226 | I | A | 0.0000 | |
| 227 | F | A | 0.0000 | |
| 228 | I | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | N | A | -0.3356 | |
| 231 | D | A | 0.0000 | |
| 232 | T | A | -0.5841 | |
| 233 | R | A | -0.8928 | |
| 234 | F | A | 0.0000 | |
| 235 | S | A | -0.7195 | |
| 236 | Q | A | -1.3377 | |
| 237 | F | A | 0.0000 | |
| 238 | L | A | 0.0000 | |
| 239 | C | A | -0.3406 | |
| 240 | P | A | -0.6405 | |
| 241 | L | A | -0.6689 | |
| 242 | A | A | -0.9195 | |
| 243 | D | A | -1.5836 | |
| 244 | Q | A | -2.0288 | |
| 245 | S | A | -1.3680 | |
| 246 | G | A | -1.2620 | |
| 247 | I | A | -1.5084 | |
| 248 | R | A | -2.1782 | |
| 249 | Q | A | -1.4808 | |
| 250 | Y | A | -0.8717 | |
| 251 | R | A | -0.9839 | |
| 252 | S | A | -0.5636 | |
| 253 | S | A | -0.2759 | |
| 254 | C | A | -0.0411 | |
| 255 | P | A | -0.1600 | |
| 256 | L | A | 0.0000 | |
| 257 | V | A | 0.1568 | |
| 258 | P | A | 0.0000 | |
| 259 | A | A | 0.0109 | |
| 260 | T | A | 0.1890 | |
| 261 | T | A | 0.3011 | |
| 262 | R | A | 0.0279 | |
| 263 | A | A | 0.5287 | |
| 264 | L | A | 1.3223 | |
| 265 | T | A | 0.4354 | |
| 266 | A | A | 0.2572 | |
| 267 | A | A | 0.4122 | |
| 268 | A | A | 0.2089 | |
| 269 | G | A | -0.1947 |