| Chain sequence(s) |
H: EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVATISSTGTYTFYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRHYYDSTHPFDYWGQGTTVTVSA
L: DVQMIQSPSSLSASLGERVSLTCRASQDIGSSLNWLQQEPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:52)
[INFO] Main: Simulation completed successfully. (00:01:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9416 | |
| 2 | V | H | -0.8406 | |
| 3 | Q | H | -0.6414 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.1609 | |
| 6 | E | H | 0.2259 | |
| 7 | S | H | -0.3757 | |
| 8 | G | H | -0.7459 | |
| 9 | G | H | -0.3010 | |
| 11 | G | H | 0.3148 | |
| 12 | L | H | 1.1044 | |
| 13 | V | H | -0.2922 | |
| 14 | K | H | -1.7860 | |
| 15 | P | H | -1.8194 | |
| 16 | G | H | -1.5109 | |
| 17 | G | H | -1.2335 | |
| 18 | S | H | -1.0650 | |
| 19 | L | H | -0.6031 | |
| 20 | K | H | -1.3193 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.2501 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0035 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.5734 | |
| 27 | G | H | -1.0730 | |
| 28 | F | H | -0.4530 | |
| 29 | T | H | -0.1872 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.6286 | |
| 36 | S | H | -0.0566 | |
| 37 | Y | H | 0.3033 | |
| 38 | T | H | 0.2312 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | T | H | -1.9032 | |
| 46 | P | H | -1.8649 | |
| 47 | E | H | -2.8721 | |
| 48 | K | H | -2.6321 | |
| 49 | R | H | -2.9945 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.0390 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | T | H | 0.7289 | |
| 56 | I | H | 0.0000 | |
| 57 | S | H | 0.5933 | |
| 58 | S | H | 0.1150 | |
| 59 | T | H | -0.1330 | |
| 62 | G | H | -0.0193 | |
| 63 | T | H | 0.4395 | |
| 64 | Y | H | 1.5308 | |
| 65 | T | H | 1.3418 | |
| 66 | F | H | 1.4671 | |
| 67 | Y | H | -0.2019 | |
| 68 | P | H | -1.3671 | |
| 69 | D | H | -2.3890 | |
| 70 | S | H | -1.7945 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.4137 | |
| 74 | G | H | -1.7352 | |
| 75 | R | H | -1.5720 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.5602 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2141 | |
| 80 | R | H | -0.8221 | |
| 81 | D | H | -1.2760 | |
| 82 | N | H | -1.4384 | |
| 83 | A | H | -1.2431 | |
| 84 | K | H | -2.1750 | |
| 85 | N | H | -1.5778 | |
| 86 | T | H | -0.8605 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.3773 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0244 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -0.9833 | |
| 93 | S | H | -1.1546 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.5702 | |
| 96 | S | H | -2.0630 | |
| 97 | E | H | -2.4610 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.7493 | |
| 100 | A | H | 0.0000 | |
| 101 | M | H | -0.0900 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | T | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | H | H | 0.1337 | |
| 108 | Y | H | 0.2305 | |
| 109 | Y | H | 0.4177 | |
| 110 | D | H | -1.2120 | |
| 111 | S | H | -0.6591 | |
| 112 | T | H | -0.4476 | |
| 113 | H | H | -0.5908 | |
| 114 | P | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.0724 | |
| 117 | Y | H | 0.5777 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1558 | |
| 121 | G | H | -0.3651 | |
| 122 | T | H | -0.2599 | |
| 123 | T | H | -0.0823 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1848 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8164 | |
| 128 | A | H | -0.4922 | |
| 1 | D | L | -2.3156 | |
| 2 | V | L | 0.0000 | |
| 3 | Q | L | -1.8974 | |
| 4 | M | L | 0.0000 | |
| 5 | I | L | -0.1211 | |
| 6 | Q | L | -0.4727 | |
| 7 | S | L | -0.4625 | |
| 8 | P | L | -0.4189 | |
| 9 | S | L | -0.5988 | |
| 10 | S | L | -0.9086 | |
| 11 | L | L | -0.4803 | |
| 12 | S | L | -0.6802 | |
| 13 | A | L | 0.0000 | |
| 14 | S | L | -0.7224 | |
| 15 | L | L | -0.2079 | |
| 16 | G | L | -1.2573 | |
| 17 | E | L | -1.9456 | |
| 18 | R | L | -2.3213 | |
| 19 | V | L | -1.1165 | |
| 20 | S | L | -0.6283 | |
| 21 | L | L | 0.0000 | |
| 22 | T | L | -0.6138 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3622 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.9435 | |
| 27 | Q | L | -2.5921 | |
| 28 | D | L | -2.7259 | |
| 29 | I | L | 0.0000 | |
| 36 | G | L | -1.1630 | |
| 37 | S | L | -0.6763 | |
| 38 | S | L | -0.4331 | |
| 39 | L | L | 0.0000 | |
| 40 | N | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | L | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | E | L | -1.3739 | |
| 46 | P | L | -1.2951 | |
| 47 | D | L | -2.2048 | |
| 48 | G | L | -1.4969 | |
| 49 | T | L | -1.2093 | |
| 50 | I | L | 0.0000 | |
| 51 | K | L | -0.4612 | |
| 52 | R | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.0039 | |
| 56 | A | L | -0.1469 | |
| 57 | T | L | 0.0000 | |
| 65 | S | L | -0.4111 | |
| 66 | S | L | -0.0948 | |
| 67 | L | L | -0.2656 | |
| 68 | D | L | -0.5285 | |
| 69 | S | L | -0.4445 | |
| 70 | G | L | -0.7458 | |
| 71 | V | L | -0.6685 | |
| 72 | P | L | -1.0342 | |
| 74 | K | L | -1.8910 | |
| 75 | R | L | -1.5200 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.6883 | |
| 78 | G | L | -0.4402 | |
| 79 | S | L | -0.8105 | |
| 80 | R | L | -1.3966 | |
| 83 | S | L | -1.1359 | |
| 84 | G | L | -1.4129 | |
| 85 | S | L | -1.9321 | |
| 86 | D | L | -1.6690 | |
| 87 | Y | L | 0.0000 | |
| 88 | S | L | -0.7993 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6193 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.6105 | |
| 93 | S | L | -1.6658 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.7643 | |
| 96 | S | L | -1.2004 | |
| 97 | E | L | -2.3024 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.7275 | |
| 100 | V | L | 0.0000 | |
| 101 | D | L | -0.9793 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | L | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | Y | L | -0.1103 | |
| 108 | A | L | -0.5565 | |
| 109 | S | L | -0.7945 | |
| 114 | S | L | -0.4630 | |
| 115 | P | L | -0.7072 | |
| 116 | P | L | -0.5854 | |
| 117 | T | L | -0.7425 | |
| 118 | F | L | -0.4131 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -1.3025 | |
| 121 | G | L | -0.9890 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.4901 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.0500 | |
| 126 | I | L | 0.5335 | |
| 127 | K | L | -0.9554 |