Project name: 87ffcaf0eba23bf

Status: done

Started: 2026-01-15 19:13:25
Settings
Chain sequence(s) H: VQLVESGGGLVQPGGSLRLSCAASGFNFSYYSIHWVRQAPGKGLEWVAYISSSSSYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYQYWQYHASWYWNGGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
L: MTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:06:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:06:20)
Show buried residues

Minimal score value
-3.8019
Maximal score value
1.8474
Average score
-0.6153
Total score value
-268.2576

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 V H 1.1112
3 Q H -0.0074
4 L H 0.0000
5 V H 0.2584
6 E H -0.0418
7 S H -0.4293
8 G H -0.8783
9 G H 0.0332
10 G H 0.8729
11 L H 1.5136
12 V H 0.2578
13 Q H -1.1632
14 P H -1.3607
15 G H -1.4385
16 G H -1.1575
17 S H -1.2449
18 L H -1.1723
19 R H -2.2019
20 L H 0.0000
21 S H -0.5299
22 C H 0.0000
23 A H -0.3148
24 A H 0.0000
25 S H -0.4092
26 G H -0.1643
27 F H 0.0406
28 N H -0.4143
29 F H 0.0000
30 S H 0.2217
31 Y H 1.3383
32 Y H 1.0113
33 S H 0.0000
34 I H 0.0000
35 H H 0.0000
36 W H 0.0000
37 V H 0.0000
38 R H 0.0000
39 Q H -0.7542
40 A H -1.2864
41 P H -0.8440
42 G H -1.4990
43 K H -2.4081
44 G H -1.6907
45 L H 0.0000
46 E H -1.2911
47 W H 0.0000
48 V H 0.0000
49 A H 0.0000
50 Y H 0.0000
51 I H 0.0000
52 S H 0.0000
52a S H -0.0392
53 S H -0.3823
54 S H -0.4009
55 S H -0.2672
56 Y H -0.0308
57 T H -0.0624
58 S H -0.3045
59 Y H -0.8716
60 A H -1.3985
61 D H -2.4291
62 S H -1.6679
63 V H 0.0000
64 K H -2.7147
65 G H -1.9188
66 R H -1.6797
67 F H 0.0000
68 T H -1.0325
69 I H 0.0000
70 S H -0.3610
71 A H -0.5560
72 D H -1.0107
73 T H -1.0229
74 S H -1.2662
75 K H -2.0734
76 N H -1.5006
77 T H 0.0000
78 A H 0.0000
79 Y H -0.4839
80 L H 0.0000
81 Q H -1.5434
82 M H 0.0000
82a N H -1.9619
82b S H -1.4979
82c L H 0.0000
83 R H -2.7902
84 A H -1.9307
85 E H -2.3509
86 D H 0.0000
87 T H -0.3717
88 A H 0.0000
89 V H 0.5623
90 Y H 0.0000
91 Y H 0.0000
92 C H 0.0000
93 A H 0.0000
94 R H 0.1199
95 G H 0.0000
96 Y H 1.0363
97 Q H 0.8155
98 Y H 0.9108
99 W H 0.0000
100 Q H 0.1917
100a Y H 0.7704
100b H H 0.1510
100c A H 0.3937
100d S H 0.9490
100e W H 1.7936
100f Y H 1.8474
100g W H 1.0075
100h N H 0.0000
100i G H 0.1296
100j G H 0.0660
100k L H 0.0000
101 D H -0.1850
102 Y H 0.3536
103 W H 0.0000
104 G H 0.0000
105 Q H -1.2880
106 G H 0.0000
107 T H 0.4051
108 L H 1.4881
109 V H 0.0000
110 T H 0.3999
111 V H -0.4638
112 S H -0.2614
113 S H -0.3895
114 A H -0.5481
115 S H -0.5638
116 T H -0.9785
117 K H -1.5701
118 G H -1.6140
119 P H -0.8848
120 S H -0.4957
121 V H 0.0000
122 F H 0.0000
123 P H -1.0063
124 L H 0.0000
125 A H -1.1828
126 P H 0.0000
127 S H -1.3528
128 S H -1.5973
129 K H -1.9900
130 S H -1.2137
131 T H -0.9976
132 S H -1.3419
133 G H -1.1905
134 G H -0.8927
135 T H -0.5566
136 A H 0.0000
137 A H 0.0000
138 L H 0.0000
139 G H 0.0000
140 C H 0.0000
141 L H 0.0000
142 V H 0.0000
143 K H -0.6741
144 D H -1.1311
145 Y H 0.0000
146 F H 0.0000
147 P H -1.3164
148 E H -1.6602
149 P H -1.3716
150 V H -0.6902
151 T H -0.5894
152 V H -0.2670
153 S H -0.2768
154 W H 0.0000
155 N H -0.6419
156 S H -0.4972
157 G H -0.5550
158 A H -0.2221
159 L H -0.0253
160 T H -0.1145
161 S H -0.1996
162 G H -0.3573
163 V H 0.1945
164 H H -0.3342
165 T H 0.0013
166 F H 0.0000
167 P H -0.2404
168 A H 0.1544
169 V H 0.4684
170 L H 1.0721
171 Q H 0.0728
172 S H -0.0758
173 S H -0.3574
174 G H -0.1894
175 L H 0.0000
176 Y H -0.0942
177 S H -0.0752
178 L H 0.2691
179 S H 0.0092
180 S H 0.0000
181 V H 0.0000
182 V H 0.0000
183 T H -0.1377
184 V H 0.0000
185 P H -0.6263
186 S H -0.7348
187 S H -0.6857
188 S H -0.9798
189 L H -0.8413
190 G H -0.9810
191 T H -1.1603
192 Q H -1.5835
193 T H -1.5648
194 Y H 0.0000
195 I H -1.1067
196 C H 0.0000
197 N H -1.0576
198 V H 0.0000
199 N H -1.8915
200 H H 0.0000
201 K H -2.7453
202 P H -1.8766
203 S H -1.9378
204 N H -2.6554
205 T H -2.1056
206 K H -2.3207
207 V H -0.7883
208 D H -1.2381
209 K H -1.4426
210 K H -2.3372
211 V H 0.0000
212 E H -2.8243
213 P H -1.9348
214 K H -2.2300
4 M L -0.8216
5 T L -0.9378
6 Q L 0.0000
7 S L -0.8051
8 P L -0.5226
9 S L -0.9736
10 S L -0.9549
11 L L -0.5971
12 S L -0.8685
13 A L 0.0000
14 S L -0.5910
15 V L 0.2302
16 G L -1.1216
17 D L -2.4990
18 R L -2.7021
19 V L 0.0000
20 T L -0.6277
21 I L 0.0000
22 T L -0.7948
23 C L 0.0000
24 R L -1.9913
25 A L -1.3022
26 S L -1.2993
27 Q L -1.5051
28 S L -0.6922
29 V L -0.0578
30 S L -0.0224
31 S L 0.8042
32 A L 0.0000
33 V L 0.0000
34 A L 0.0000
35 W L 0.0000
36 Y L 0.0000
37 Q L 0.0000
38 Q L 0.0000
39 K L -1.6565
40 P L -1.2024
41 G L -1.6672
42 K L -2.5219
43 A L -1.5726
44 P L 0.0000
45 K L -1.3138
46 L L 0.0000
47 L L 0.0000
48 I L 0.0000
49 Y L 0.5452
50 S L 0.7440
51 A L 0.0000
52 S L -0.1596
53 S L 0.2664
54 L L 0.6499
55 Y L 0.4901
56 S L 0.0168
57 G L -0.2628
58 V L 0.1007
59 P L -0.1980
60 S L -0.2913
61 R L -0.7318
62 F L 0.0000
63 S L -0.2779
64 G L -0.4671
65 S L -1.1775
66 R L -2.0262
67 S L -1.3581
68 G L -1.1357
69 T L -1.3402
70 D L -1.5646
71 F L 0.0000
72 T L -0.8501
73 L L 0.0000
74 T L -0.5893
75 I L 0.0000
76 S L -1.4622
77 S L -1.4244
78 L L 0.0000
79 Q L -1.1342
80 P L -0.9191
81 E L -1.9013
82 D L 0.0000
83 F L -0.5907
84 A L 0.0000
85 T L 0.0000
86 Y L 0.0000
87 Y L 0.0000
88 C L 0.0000
89 Q L 0.0000
90 Q L 0.0000
91 S L 0.0000
92 S L -0.1727
93 S L -0.0448
94 S L 0.0572
95 L L 0.0497
96 I L 0.0000
97 T L -0.1224
98 F L -0.3411
99 G L 0.0000
100 Q L -1.7799
101 G L -1.3491
102 T L 0.0000
103 K L -1.9943
104 V L 0.0000
105 E L -0.8901
106 I L -0.2007
107 K L -1.1220
108 R L -0.9790
109 T L 0.1236
110 V L 0.8692
111 A L 0.2510
112 A L -0.0771
113 P L 0.0000
114 S L -0.2296
115 V L 0.0000
116 F L 0.0000
117 I L 0.0000
118 F L 0.0000
119 P L -0.7878
120 P L -0.7089
121 S L 0.0000
122 D L -2.1252
123 S L -1.4800
124 Q L 0.0000
125 L L -1.4381
126 K L -2.1607
127 S L -1.3386
128 G L -0.9126
129 T L -0.7236
130 A L 0.0000
131 S L 0.0000
132 V L 0.0000
133 V L 0.0000
134 C L 0.0000
135 L L 0.0000
136 L L 0.0000
137 N L 0.0000
138 N L -1.3822
139 F L 0.0000
140 Y L 0.0000
141 P L -1.8813
142 R L -3.1935
143 E L -3.2837
144 A L -2.3978
145 K L -2.4484
146 V L -1.0405
147 Q L -0.5939
148 W L 0.0000
149 K L -0.5376
150 V L 0.0000
151 D L -1.6440
152 N L -1.3454
153 A L -0.3019
154 L L 0.7332
155 Q L -0.2940
156 S L -0.6658
157 G L -1.1920
158 N L -1.3277
159 S L -1.4334
160 Q L -1.6700
161 E L -1.4958
162 S L -0.7749
163 V L -0.7635
164 T L -1.2797
165 E L -2.5672
166 Q L -2.7730
167 D L -2.6405
168 S L -2.2048
169 K L -2.9357
170 D L -3.1465
171 S L -2.5587
172 T L 0.0000
173 Y L 0.0000
174 S L 0.0000
175 L L 0.0000
176 S L -0.4188
177 S L 0.0000
178 T L -0.7412
179 L L 0.0000
180 T L -0.4690
181 L L -0.7985
182 S L -1.1030
183 K L -2.0261
184 A L -1.9772
185 D L -2.8391
186 Y L 0.0000
187 E L -3.8019
188 K L -3.7247
189 H L -3.1922
190 K L -3.3500
191 V L -2.0798
192 Y L 0.0000
193 A L -0.6942
194 C L 0.0000
195 E L -0.8067
196 V L 0.0000
197 T L -1.1114
198 H L 0.0000
199 Q L -1.5738
200 G L -0.4293
201 L L -0.3294
202 S L -0.4365
203 S L -0.3776
204 P L -0.4527
205 V L 0.1571
206 T L -0.3652
207 K L -0.5917
208 S L -0.8187
209 F L -1.1552
210 N L -2.4361
211 R L -3.3702
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Laboratory of Theory of Biopolymers 2018