| Chain sequence(s) |
A: MNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | GD335A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 3.38986 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:10)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:18)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 311 | M | A | 0.8354 | |
| 312 | N | A | 0.0873 | |
| 313 | F | A | 1.5762 | |
| 314 | G | A | 1.1795 | |
| 315 | A | A | 1.4286 | |
| 316 | F | A | 2.3787 | |
| 317 | S | A | 1.5757 | |
| 318 | I | A | 1.7520 | |
| 319 | N | A | -0.0234 | |
| 320 | P | A | 0.1887 | |
| 321 | A | A | 0.5136 | |
| 322 | M | A | 1.1834 | |
| 323 | M | A | 1.0231 | |
| 324 | A | A | 0.5737 | |
| 325 | A | A | 0.6202 | |
| 326 | A | A | 0.6558 | |
| 327 | Q | A | 0.2127 | |
| 328 | A | A | 0.1545 | |
| 329 | A | A | 0.3162 | |
| 330 | L | A | 0.8386 | |
| 331 | Q | A | -0.1217 | |
| 332 | S | A | 0.0876 | |
| 333 | S | A | 0.3833 | |
| 334 | W | A | 0.9741 | |
| 335 | D | A | 0.1401 | mutated: GD335A |
| 336 | M | A | 1.2294 | |
| 337 | M | A | 1.3289 | |
| 338 | G | A | 0.4703 | |
| 339 | M | A | 0.7759 | |
| 340 | L | A | 0.2327 | |
| 341 | A | A | -0.5688 | |
| 342 | S | A | -0.9404 | |
| 343 | Q | A | -1.9950 | |
| 344 | Q | A | -2.8134 | |
| 345 | N | A | -2.7223 | |
| 346 | Q | A | -2.5992 | |
| 347 | S | A | -2.2645 | |
| 348 | G | A | -1.6497 | |
| 349 | P | A | -1.4870 | |
| 350 | S | A | -1.3416 | |
| 351 | G | A | -2.2234 | |
| 352 | N | A | -3.1851 | |
| 353 | N | A | -3.0938 | |
| 354 | Q | A | -3.5898 | |
| 355 | N | A | -3.1841 | |
| 356 | Q | A | -3.0762 | |
| 357 | G | A | -2.6547 | |
| 358 | N | A | -2.1556 | |
| 359 | M | A | -0.4648 | |
| 360 | Q | A | -1.3593 |